Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.95□□□□□ -1.62
RTF1Q92541 AL358934.1-201ENST00000432346 324 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AL451074.3-201ENST00000437709 472 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 SDCBPP1-201ENST00000440192 890 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 MTCO3P18-201ENST00000440206 761 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AC079448.1-201ENST00000449377 373 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 HMGB1P15-201ENST00000453854 435 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 MTCO3P20-201ENST00000454926 688 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AC133473.1-201ENST00000455173 299 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.95□□□□□ -1.62
RTF1Q92541 AL359385.1-201ENST00000456509 365 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AC023598.1-201ENST00000472521 361 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 FAM92A1P2-202ENST00000504766 877 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.95□□□□□ -1.62
RTF1Q92541 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 AC007991.1-201ENST00000522680 631 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 AC092470.1-201ENST00000546187 132 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 AL139286.1-201ENST00000604465 483 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 SNORA51-201ENST00000606420 132 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 AL034408.1-202ENST00000636088 415 ntBASIC4.95□□□□□ -1.62
RTF1Q92541 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.95□□□□□ -1.62
RTF1Q92541 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTF1Q92541 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTF1Q92541 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTF1Q92541 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTF1Q92541 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
RTF1Q92541 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTF1Q92541 SAGE2P-201ENST00000420011 2126 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTF1Q92541 RNY4P14-201ENST00000363656 96 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 MIR449B-201ENST00000384995 97 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 CALM2P3-201ENST00000400429 449 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.94□□□□□ -1.62
RTF1Q92541 CCNG1P1-201ENST00000406783 885 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC069157.1-201ENST00000421749 137 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.94□□□□□ -1.62
RTF1Q92541 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RTF1Q92541 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RTF1Q92541 AL451050.1-201ENST00000450126 415 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 IFNWP4-201ENST00000453148 294 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.94□□□□□ -1.62
RTF1Q92541 AP1S2P1-201ENST00000457344 379 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 UBDP1-202ENST00000457888 382 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.94□□□□□ -1.62
RTF1Q92541 RBM43P1-201ENST00000476891 1081 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.94□□□□□ -1.62
RTF1Q92541 AC114967.1-201ENST00000504890 259 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.94□□□□□ -1.62
RTF1Q92541 RAC1P2-201ENST00000511164 579 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC022616.6-201ENST00000520479 119 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.94□□□□□ -1.62
RTF1Q92541 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.94□□□□□ -1.62
RTF1Q92541 OR5AQ1P-201ENST00000527596 927 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RTF1Q92541 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.94□□□□□ -1.62
RTF1Q92541 AC008739.3-201ENST00000603262 127 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 SNORA62.6-201ENST00000606322 83 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC009159.1-201ENST00000618386 642 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.94□□□□□ -1.62
RTF1Q92541 MIR6715B-201ENST00000637172 77 ntBASIC4.94□□□□□ -1.62
RTF1Q92541 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.94□□□□□ -1.62
RTF1Q92541 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTF1Q92541 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.94□□□□□ -1.62
RTF1Q92541 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTF1Q92541 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RTF1Q92541 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
RTF1Q92541 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RTF1Q92541 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTF1Q92541 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTF1Q92541 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RTF1Q92541 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.93□□□□□ -1.62
RTF1Q92541 RNU6-195P-201ENST00000411352 109 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 USP9YP6-201ENST00000413550 854 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 MTND3P17-201ENST00000416968 344 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 AC087650.1-201ENST00000431445 468 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 AC011742.1-201ENST00000431448 434 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 SNORA71B-202ENST00000439232 272 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.93□□□□□ -1.62
RTF1Q92541 AC112653.1-201ENST00000443851 386 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.93□□□□□ -1.62
RTF1Q92541 AL358232.1-201ENST00000448030 501 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.93□□□□□ -1.62
RTF1Q92541 FGF7P3-201ENST00000454645 303 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 C1DP4-201ENST00000455429 424 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.93□□□□□ -1.62
RTF1Q92541 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.93□□□□□ -1.62
RTF1Q92541 AC009646.1-201ENST00000510455 318 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.93□□□□□ -1.62
RTF1Q92541 AC016065.2-201ENST00000514530 444 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 RNU6-528P-201ENST00000516926 100 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.93□□□□□ -1.62
RTF1Q92541 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.93□□□□□ -1.62
RTF1Q92541 AC026403.1-201ENST00000518938 295 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms