Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 NUP58P1-201ENST00000502546 1738 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MTCO1P23-201ENST00000415223 1526 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MIR26A1-201ENST00000362205 77 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 CD24P4-201ENST00000382840 243 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 SNRPEP2-201ENST00000397592 279 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 RNU4-22P-201ENST00000411058 166 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 RPL19P1-201ENST00000411635 428 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC068533.2-201ENST00000411872 306 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC007435.1-201ENST00000421086 415 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MTCO2P23-201ENST00000425216 680 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 DUTP6-201ENST00000425573 462 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC006946.1-201ENST00000429106 328 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL513043.1-201ENST00000439124 535 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 RPS3AP12-201ENST00000443616 753 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MRPL50P4-201ENST00000446432 475 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL009048.1-201ENST00000450437 298 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC003982.1-202ENST00000469928 248 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC069528.1-202ENST00000482888 637 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC105914.1-201ENST00000511798 226 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC008837.2-201ENST00000513076 418 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 SNORA70.24-201ENST00000517233 118 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AP001189.2-201ENST00000527320 189 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL355836.1-201ENST00000555951 870 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC005046.1-201ENST00000608515 625 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AL157392.4-201ENST00000609756 345 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC004696.1-201ENST00000614345 607 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC092650.2-201ENST00000619984 902 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC109454.4-201ENST00000623411 649 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC091925.2-201ENST00000625059 256 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 AC099654.9-201ENST00000637055 678 ntBASIC2.34□□□□□ -2.03
RTN4IP1Q8WWV3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.34□□□□□ -2.04
RTN4IP1Q8WWV3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 SNRPEP3-201ENST00000338402 276 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 SNORA70.4-201ENST00000365509 134 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RNU6-821P-201ENST00000390995 107 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 TMSB4XP8-201ENST00000402089 135 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RNU6-712P-201ENST00000410558 100 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 TMSB4XP6-201ENST00000415187 135 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 TMSB4XP1-201ENST00000424567 135 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RPL35AP12-201ENST00000425362 338 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RPL37P4-201ENST00000448908 268 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RSL24D1P3-201ENST00000449255 495 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RPS20P24-201ENST00000457473 361 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 snoU109.3-201ENST00000459477 145 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC119751.4-201ENST00000507498 357 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 MTCYBP16-201ENST00000509187 1129 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 RNY4P37-201ENST00000516225 96 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 ERHP1-201ENST00000523006 310 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 OR10V3P-201ENST00000525712 725 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC091057.2-201ENST00000602594 792 ntBASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.33□□□□□ -2.04
RTN4IP1Q8WWV3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms