Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 DUXAP4-201ENST00000603046 613 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC008638.3-201ENST00000603341 463 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC073648.5-201ENST00000603502 305 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AL161756.2-201ENST00000604597 246 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AL161729.4-201ENST00000604650 476 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC007038.2-201ENST00000608095 740 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC004908.2-201ENST00000609090 574 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC015967.1-201ENST00000619893 476 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC110994.2-201ENST00000635481 492 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC004925.1-201ENST00000624256 2706 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 Y_RNA.41-201ENST00000362646 102 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RN7SKP44-201ENST00000363602 316 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU4-1-201ENST00000363925 141 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU5A-8P-201ENST00000364102 114 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU6-1074P-201ENST00000383995 104 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU6-637P-201ENST00000384050 107 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU6-754P-201ENST00000391166 107 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 MRPL42P2-201ENST00000403169 426 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 MIR1251-201ENST00000408552 70 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU6-516P-201ENST00000411381 104 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 HMGN1P24-201ENST00000412282 298 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RPL7AP73-201ENST00000413490 353 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AL031779.1-201ENST00000415663 330 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 HMGN2P31-201ENST00000432430 273 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 TIMM9P1-201ENST00000436122 256 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC010285.1-201ENST00000470580 392 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC110768.1-201ENST00000509222 400 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RNU6-430P-201ENST00000517078 107 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 MTCO2P4-201ENST00000517968 247 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC012182.1-201ENST00000570133 895 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 AC080078.2-201ENST00000603766 501 ntBASIC3.94□□□□□ -1.78
HMGB4Q8WW32 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGB4Q8WW32 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 Y_RNA.3-201ENST00000362331 103 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RNU6-882P-201ENST00000391025 103 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RPS3AP36-201ENST00000398190 775 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RNU2-43P-201ENST00000410306 190 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RNU6-195P-201ENST00000411352 109 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 MTCO1P21-201ENST00000416634 589 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AL591419.1-201ENST00000427423 339 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RPS6P12-201ENST00000432491 726 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC092473.1-201ENST00000441098 221 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RANP8-201ENST00000444720 713 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 ELOCP30-201ENST00000447108 299 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms