Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC022018.1-201ENST00000430685 241 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL121890.1-201ENST00000435457 205 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC000367.1-201ENST00000452711 1766 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 MTCYBP1-201ENST00000454315 1119 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 SNRPGP5-201ENST00000456003 220 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 RPL21P71-201ENST00000465598 459 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC128713.1-201ENST00000471495 306 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC011979.1-201ENST00000472300 483 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 RPS4XP22-201ENST00000480755 780 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 RNU4-29P-201ENST00000515943 174 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 IGLVIV-53-201ENST00000520107 367 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 CENPUP2-201ENST00000555897 1186 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC234778.2-201ENST00000566241 354 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC012435.1-202ENST00000568772 240 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL592148.2-201ENST00000612210 372 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC004825.2-201ENST00000616634 455 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 C2orf27A-204ENST00000623058 969 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC091903.1-201ENST00000624322 454 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC005609.4-201ENST00000625071 447 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNED1Q8TER0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNED1Q8TER0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC012020.1-201ENST00000624541 1728 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 Y_RNA.6-201ENST00000362350 114 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 RNU6-353P-201ENST00000364266 108 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 snoZ40.1-201ENST00000364540 72 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 RNU6-1200P-201ENST00000384162 107 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 RNU6-549P-201ENST00000384433 107 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 SNORA67.4-201ENST00000384688 142 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 MIR153-1-201ENST00000384914 90 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 SNORA26.8-201ENST00000391306 124 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AL445529.1-201ENST00000398713 389 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 HMGB3P31-201ENST00000413333 595 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC092170.1-201ENST00000440211 356 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC097499.1-201ENST00000444277 208 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 RPS3P1-201ENST00000456781 192 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 RNU7-140P-201ENST00000459546 60 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 RN7SKP60-201ENST00000516985 239 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC090281.1-201ENST00000523019 276 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 AL133241.1-201ENST00000556832 487 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AL512347.1-201ENST00000566420 503 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 ISCA1P3-201ENST00000577104 373 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 MIR5708-201ENST00000579723 85 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 RPL23AP92-201ENST00000603609 255 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC128687.1-201ENST00000605304 619 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC006270.3-201ENST00000605967 1036 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC004832.5-201ENST00000608677 401 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC004223.4-201ENST00000612426 332 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC022509.4-201ENST00000621404 572 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC008443.7-201ENST00000622195 246 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC243829.7-201ENST00000633081 225 ntBASIC3.64□□□□□ -1.83
SNED1Q8TER0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SNED1Q8TER0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNED1Q8TER0 DCAF13P1-201ENST00000495256 1330 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 MIR423-201ENST00000362201 94 ntBASIC3.63□□□□□ -1.83
SNED1Q8TER0 AL360182.1-201ENST00000397433 468 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms