Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC087588.1-201ENST00000462203 316 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 MTND4LP3-201ENST00000468320 276 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 RPL31P60-201ENST00000478450 367 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 OR4R1P-201ENST00000529879 463 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC079600.2-201ENST00000550076 130 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 MIR3200-201ENST00000580767 85 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLHC1Q8NHS4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLHC1Q8NHS4 AL022578.1-201ENST00000439330 1433 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 CR848007.1-201ENST00000442354 1699 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CLHC1Q8NHS4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 GNG5P1-201ENST00000255500 204 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLHC1Q8NHS4 DEFB108F-201ENST00000344638 222 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 RNU6-792P-201ENST00000363490 107 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 SNORD51-201ENST00000384320 80 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 SNORD65C-201ENST00000390962 71 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 RNU6-882P-201ENST00000391025 103 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AL024474.1-201ENST00000404655 591 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC096664.2-201ENST00000411843 406 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC007064.1-201ENST00000412238 351 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC080125.1-201ENST00000414888 684 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC008173.1-201ENST00000418901 264 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC090774.1-201ENST00000435925 246 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AL445687.1-201ENST00000439946 251 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 CDC42P1-201ENST00000456658 548 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AL049714.1-201ENST00000466686 347 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC025881.1-201ENST00000518851 512 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 ARL2BPP5-201ENST00000523141 481 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 COX6CP5-201ENST00000527162 228 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 DEFB108D-201ENST00000527787 222 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLHC1Q8NHS4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 MIR3921-201ENST00000577308 85 ntBASIC2.55□□□□□ -2
CLHC1Q8NHS4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLHC1Q8NHS4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.55□□□□□ -2
CLHC1Q8NHS4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLHC1Q8NHS4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLHC1Q8NHS4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 NPM1P10-201ENST00000398310 865 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AL356057.3-201ENST00000402607 340 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AL513475.1-201ENST00000406602 315 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 MIR1290-201ENST00000408735 78 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 AL513175.2-201ENST00000422071 443 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 AL358075.3-201ENST00000426289 226 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC091390.3-201ENST00000426478 338 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 RSL24D1P8-201ENST00000434442 492 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 RAC1P7-201ENST00000445367 377 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC027673.1-201ENST00000456245 405 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 RBM43P1-201ENST00000476891 1081 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 SETP6-201ENST00000479329 568 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC010468.3-201ENST00000508225 458 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 TBCAP3-201ENST00000512475 312 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 AL731537.2-201ENST00000561565 951 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.54□□□□□ -2
CLHC1Q8NHS4 ZNF92P2-201ENST00000600543 1059 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 GAS5-AS1-201ENST00000602767 694 ntBASIC2.54□□□□□ -2
CLHC1Q8NHS4 AC013444.2-201ENST00000603317 787 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms