Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RMST_7.1-201ENST00000621935 268 ntBASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 AC022418.1-201ENST00000624118 445 ntBASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 AP001052.1-201ENST00000626421 99 ntBASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 MTND1P37-201ENST00000636562 264 ntBASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 Z99571.1-201ENST00000636677 394 ntBASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 AC112487.2-201ENST00000637950 304 ntBASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN3Q8NCR9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 BRAFP1-201ENST00000445336 2703 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 SNORA21-201ENST00000362423 132 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RNU4-73P-201ENST00000363164 141 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RN7SKP250-201ENST00000363924 321 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 Y_RNA.245-201ENST00000364493 95 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 DEFB109C-201ENST00000382575 264 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 DEFB109B-201ENST00000382656 264 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AL122016.1-201ENST00000403365 367 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RPL35AP3-201ENST00000414680 288 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RPLP0P7-201ENST00000416050 667 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RPL7AP51-201ENST00000422016 760 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC007919.1-201ENST00000429380 217 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RPS6P12-201ENST00000432491 726 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RNU7-66P-201ENST00000459469 62 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RN7SL254P-201ENST00000460609 284 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 SNORA19.2-201ENST00000516013 114 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RNA5SP290-201ENST00000517133 127 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RNU6-1315P-201ENST00000517187 99 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC036111.2-201ENST00000533247 901 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AC007687.1-201ENST00000602704 304 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 AL713922.2-201ENST00000619384 716 ntBASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN3Q8NCR9 ZNF285B-201ENST00000561698 1767 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC010733.2-201ENST00000589496 5702 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 EOGT-210ENST00000615922 1931 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AL672296.1-201ENST00000427780 2158 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 RNA5SP77-201ENST00000365394 120 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 RNU6-45P-201ENST00000384471 107 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 MIR589-201ENST00000385238 99 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AL035079.1-201ENST00000405210 287 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AL356967.1-201ENST00000406305 431 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC063979.1-201ENST00000415539 377 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 GPM6BP2-201ENST00000432046 144 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 GPM6BP1-201ENST00000446387 144 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 RN7SL568P-201ENST00000493069 298 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 MTCO1P29-201ENST00000496868 288 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 RNU6-864P-201ENST00000516256 108 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC090136.1-201ENST00000520009 240 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC005868.1-201ENST00000536421 331 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 SCOCP1-201ENST00000554676 349 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms