Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC079203.1-201ENST00000487972 404 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 OR6C73P-201ENST00000546432 358 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC128687.1-201ENST00000605304 619 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC145207.9-201ENST00000623802 325 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC131280.1-202ENST00000624067 4211 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 RNU6-661P-201ENST00000362409 107 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 U8.10-201ENST00000384260 133 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 RNU2-71P-201ENST00000411395 189 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 HMGN2P19-201ENST00000425149 265 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 Z82205.1-201ENST00000428456 297 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 NDUFB4P6-201ENST00000436819 366 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS8Q8N3P4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS8Q8N3P4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS8Q8N3P4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS8Q8N3P4 AC016727.1-205ENST00000605437 569 ntBASIC2.61□□□□□ -1.99
VPS8Q8N3P4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS8Q8N3P4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.6□□□□□ -1.99
VPS8Q8N3P4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 AC069528.1-202ENST00000482888 637 ntBASIC2.6□□□□□ -1.99
VPS8Q8N3P4 RPL21P131-201ENST00000497298 483 ntBASIC2.6□□□□□ -1.99
VPS8Q8N3P4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 AC067805.1-201ENST00000559344 470 ntBASIC2.6□□□□□ -1.99
VPS8Q8N3P4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 ZNF33CP-201ENST00000432492 2030 ntBASIC2.6□□□□□ -1.99
VPS8Q8N3P4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VPS8Q8N3P4 AC110792.3-201ENST00000595906 1614 ntBASIC2.6□□□□□ -1.99
VPS8Q8N3P4 Z98749.2-208ENST00000381646 500 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 RNU1-109P-201ENST00000383960 147 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 RN7SKP101-201ENST00000411376 320 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 CDC42P1-201ENST00000456658 548 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 MTATP6P22-201ENST00000507369 598 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 MTCO2P32-201ENST00000514865 403 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 ZNF876P-202ENST00000398732 1485 ntBASIC2.59□□□□□ -1.99
VPS8Q8N3P4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VPS8Q8N3P4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.59□□□□□ -2
VPS8Q8N3P4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
VPS8Q8N3P4 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.59□□□□□ -2
VPS8Q8N3P4 AC025181.1-201ENST00000477507 416 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 RNU4-60P-201ENST00000517239 135 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.59□□□□□ -2
VPS8Q8N3P4 AC024614.2-201ENST00000577584 372 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 AC013444.2-201ENST00000603317 787 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 AC006249.1-201ENST00000621223 471 ntBASIC2.59□□□□□ -2
VPS8Q8N3P4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.58□□□□□ -2
VPS8Q8N3P4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.58□□□□□ -2
VPS8Q8N3P4 AC002546.1-201ENST00000588041 2504 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 AL034374.1-201ENST00000406329 351 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 MIR1323-201ENST00000408090 73 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.58□□□□□ -2
VPS8Q8N3P4 SSXP1-201ENST00000453640 473 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 AMD1P1-201ENST00000457220 922 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 NF1P3-201ENST00000457709 450 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.58□□□□□ -2
VPS8Q8N3P4 RNA5SP364-201ENST00000516938 78 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.58□□□□□ -2
VPS8Q8N3P4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.58□□□□□ -2
VPS8Q8N3P4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.58□□□□□ -2
VPS8Q8N3P4 HMGN2P28-201ENST00000606102 262 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 AP003072.4-201ENST00000624580 310 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 MTND5P3-201ENST00000438536 1800 ntBASIC2.58□□□□□ -2
VPS8Q8N3P4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
VPS8Q8N3P4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 TAS2R15P-201ENST00000390674 928 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.57□□□□□ -2
VPS8Q8N3P4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.57□□□□□ -2
VPS8Q8N3P4 RN7SL274P-201ENST00000492268 272 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.57□□□□□ -2
VPS8Q8N3P4 AC096571.1-202ENST00000506634 735 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 AC234775.3-201ENST00000564612 656 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 MIR4303-201ENST00000581299 66 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 AL391813.2-201ENST00000609113 322 ntBASIC2.57□□□□□ -2
VPS8Q8N3P4 AC022079.2-201ENST00000619739 566 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms