Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ZNF549Q6P9A3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
ZNF549Q6P9A3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
ZNF549Q6P9A3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
ZNF549Q6P9A3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 RPL23AP57-201ENST00000332361 466 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 RNA5SP502-201ENST00000362694 119 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 RNU6-282P-201ENST00000365357 103 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 RPL21P111-201ENST00000418453 477 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 USP9YP27-201ENST00000418455 438 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AL353193.1-201ENST00000421444 268 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 RPL21P109-201ENST00000422213 475 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 HMGN3P1-201ENST00000453847 193 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 MTCO3P2-201ENST00000457365 171 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 MTND1P35-201ENST00000526739 508 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC068446.3-201ENST00000555285 382 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AL512360.1-201ENST00000555346 234 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC025678.1-201ENST00000567861 338 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 MIR4716-201ENST00000579628 84 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 MAGOH2P-202ENST00000584384 429 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 TPMTP1-201ENST00000592307 737 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 SNORA62.6-201ENST00000606322 83 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 FP236240.3-201ENST00000623061 327 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 AC107081.3-201ENST00000612715 2034 ntBASIC3.77□□□□□ -1.81
ZNF549Q6P9A3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.46-201ENST00000362695 102 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.160-201ENST00000363677 92 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC019155.1-201ENST00000382242 574 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 Y_RNA.573-201ENST00000384763 105 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RNU6-1009P-201ENST00000390996 107 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RPL31P52-201ENST00000407532 367 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RN7SKP285-201ENST00000410137 318 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RPS27AP12-201ENST00000429552 465 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RPL31P35-201ENST00000431058 377 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC002486.1-201ENST00000435098 391 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 SDCBPP1-201ENST00000440192 890 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 MTCO2P30-201ENST00000503662 364 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC022695.1-201ENST00000522089 237 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 HSPA8P13-201ENST00000523715 472 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AL512310.1-201ENST00000548639 172 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC034268.2-201ENST00000571784 482 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AL606490.9-201ENST00000603331 271 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC245014.2-201ENST00000603689 287 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC246785.4-201ENST00000605374 287 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 HSPE1P14-201ENST00000605812 302 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AL445264.1-201ENST00000621719 171 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC010338.1-201ENST00000621823 717 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AC009033.1-201ENST00000624279 431 ntBASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
ZNF549Q6P9A3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms