Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AP000907.2-201ENST00000530827 353 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 HMGB2P1-201ENST00000591146 634 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC010201.1-201ENST00000605051 540 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC055876.5-201ENST00000605667 259 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC092954.2-201ENST00000609103 430 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 AC068880.5-201ENST00000624331 290 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 CR381572.1-201ENST00000625098 102 ntBASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A4Q53GD3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 SNORA72.1-201ENST00000363485 129 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 RNU6-359P-201ENST00000365466 108 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AL353777.1-201ENST00000425552 326 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 FTH1P1-201ENST00000437933 532 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AL500522.2-201ENST00000448562 343 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC108022.1-201ENST00000493466 478 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 RNU6-507P-201ENST00000516045 100 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 Y_RNA.672-201ENST00000516289 104 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 SETP7-201ENST00000552169 453 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AL356432.3-201ENST00000568952 465 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC012669.1-201ENST00000603209 283 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AL355812.1-201ENST00000603215 216 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC011816.2-201ENST00000607089 556 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC103710.1-201ENST00000610003 901 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 TUG1_1.1-201ENST00000610654 145 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC124864.2-201ENST00000624736 186 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 PISRT1-201ENST00000626175 531 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC012442.3-202ENST00000636742 206 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 MIR3688-2-201ENST00000636963 87 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC099654.10-201ENST00000640395 161 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
SLC44A4Q53GD3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SLC44A4Q53GD3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SLC44A4Q53GD3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SLC44A4Q53GD3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SLC44A4Q53GD3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 Z73965.1-201ENST00000623412 2297 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 FARSBP1-201ENST00000435808 1778 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 FRG1BP-201ENST00000278882 761 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.372-201ENST00000365599 102 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AL590704.1-201ENST00000402856 794 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 MIR1277-201ENST00000408536 78 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC019097.1-201ENST00000424783 735 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC104850.1-201ENST00000435940 476 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 MTATP6P30-201ENST00000443540 664 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 MTND5P20-201ENST00000448677 143 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC055855.1-201ENST00000489563 579 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC106872.2-201ENST00000494303 480 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC069439.1-201ENST00000494739 167 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC020893.1-201ENST00000502452 580 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC091133.4-201ENST00000511142 308 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 RNU4-60P-201ENST00000517239 135 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC107934.1-201ENST00000522215 217 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 VN1R79P-201ENST00000593540 513 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC115621.1-201ENST00000604653 858 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 RNU6-87P-201ENST00000607561 108 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 BX664608.1-201ENST00000610519 487 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 AC091953.2-201ENST00000623979 160 ntBASIC4.33□□□□□ -1.72
SLC44A4Q53GD3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms