Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC062016.1-201ENST00000355719 319 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 RPS15AP38-201ENST00000413110 372 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 CABYRP1-201ENST00000465493 1045 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC097462.2-201ENST00000504623 481 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 MLLT10P2-201ENST00000506434 249 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC022069.1-201ENST00000582910 658 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 NTAN1P1-201ENST00000603150 646 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC024220.1-201ENST00000603675 484 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC107294.1-201ENST00000609524 467 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC079395.3-201ENST00000615161 484 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 MIR6817-201ENST00000615588 66 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC004777.1-201ENST00000624317 287 ntBASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC58Q4VC31 AC008432.1-201ENST00000615912 1320 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 SNORA67.4-201ENST00000384688 142 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AL023807.1-201ENST00000407932 359 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 RNA5SP80-201ENST00000410475 111 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 ZNF90P2-204ENST00000419323 1075 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC005005.2-201ENST00000420779 380 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AL358075.3-201ENST00000426289 226 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AL513175.1-201ENST00000431492 780 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 OR6C71P-201ENST00000432580 913 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 RPS3P1-201ENST00000456781 192 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AL672167.3-201ENST00000465951 960 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC111193.1-201ENST00000504097 155 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 CBX3P3-201ENST00000508108 532 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 RN7SKP283-201ENST00000517197 270 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 OR11H5P-201ENST00000554039 926 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 GTF2IP8-201ENST00000560687 584 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC090888.1-201ENST00000561335 1141 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC046143.2-201ENST00000609789 160 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 AC025594.3-201ENST00000613068 790 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 SDR42E1P2-201ENST00000614861 481 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
CCDC58Q4VC31 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC58Q4VC31 Z99496.1-201ENST00000469424 1477 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 RNU6-525P-201ENST00000363685 104 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 MIR767-201ENST00000390228 109 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 RNA5SP184-201ENST00000411071 108 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 HMGB3P31-201ENST00000413333 595 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 HMGB1P11-201ENST00000413899 637 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 NANOGP5-201ENST00000424456 877 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 WASF1P1-201ENST00000447560 1131 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 RPS15AP27-201ENST00000449183 343 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 BX248409.1-201ENST00000455497 255 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 PNPLA4P1-201ENST00000458328 305 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC026801.2-201ENST00000515352 425 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 RPL7P20-201ENST00000520308 745 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 MTCYBP20-201ENST00000524239 1129 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC58Q4VC31 DPRXP5-201ENST00000604662 539 ntBASIC1.94□□□□□ -2.1
CCDC58Q4VC31 AC012468.1-201ENST00000604888 430 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms