Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
IRF9Q00978 AL450472.3-201ENST00000615578 367 ntBASIC4.51□□□□□ -1.69
IRF9Q00978 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.51□□□□□ -1.69
IRF9Q00978 RMST_7.1-201ENST00000621935 268 ntBASIC4.51□□□□□ -1.69
IRF9Q00978 U3.53-201ENST00000628922 216 ntBASIC4.51□□□□□ -1.69
IRF9Q00978 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.51□□□□□ -1.69
IRF9Q00978 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
IRF9Q00978 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
IRF9Q00978 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
IRF9Q00978 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
IRF9Q00978 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
IRF9Q00978 MTND5P3-201ENST00000438536 1800 ntBASIC4.51□□□□□ -1.69
IRF9Q00978 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
IRF9Q00978 API5P2-201ENST00000397055 1498 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.5□□□□□ -1.69
IRF9Q00978 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.5□□□□□ -1.69
IRF9Q00978 AL590240.1-201ENST00000334118 313 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 Y_RNA.100-201ENST00000363141 102 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 SNORD115-7-201ENST00000365306 82 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
IRF9Q00978 RN7SKP267-201ENST00000410381 285 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC068533.1-201ENST00000418542 415 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC099677.1-201ENST00000420575 175 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.5□□□□□ -1.69
IRF9Q00978 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC004866.2-201ENST00000438285 481 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AL772161.1-201ENST00000439130 476 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AL121871.1-201ENST00000443413 436 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
IRF9Q00978 GAPDHP27-201ENST00000447427 1020 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 RPL7L1P1-201ENST00000448259 785 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AL590639.1-201ENST00000456484 337 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 SNRPFP3-201ENST00000457792 225 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC010631.1-201ENST00000474150 156 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 RN7SL41P-201ENST00000476144 297 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC231760.1-201ENST00000498002 260 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC108145.1-201ENST00000503770 153 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC007016.1-201ENST00000512110 244 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC090151.1-201ENST00000520784 730 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC100770.1-201ENST00000532310 322 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC093027.1-201ENST00000546698 429 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.5□□□□□ -1.69
IRF9Q00978 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC005668.1-201ENST00000571142 476 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 MIR3667-201ENST00000581025 74 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 MIR4742-201ENST00000581069 85 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.5□□□□□ -1.69
IRF9Q00978 AF038458.1-201ENST00000588406 262 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 HMGB2P1-201ENST00000591146 634 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.5□□□□□ -1.69
IRF9Q00978 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC016727.1-205ENST00000605437 569 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC021646.1-201ENST00000605469 484 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 MIR6853-201ENST00000619642 74 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC091905.2-201ENST00000623143 306 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 AP003400.5-201ENST00000624827 617 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.5□□□□□ -1.69
IRF9Q00978 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.5□□□□□ -1.69
IRF9Q00978 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.5□□□□□ -1.69
IRF9Q00978 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
IRF9Q00978 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
IRF9Q00978 MTND4P23-201ENST00000447723 1363 ntBASIC4.5□□□□□ -1.69
IRF9Q00978 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
IRF9Q00978 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.49□□□□□ -1.69
IRF9Q00978 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
IRF9Q00978 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC139769.1-204ENST00000472297 1931 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 AC021146.4-201ENST00000309229 279 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 RNU4-79P-201ENST00000362764 141 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 RN7SKP103-201ENST00000363848 320 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 SNORA51.2-201ENST00000364595 132 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 Y_RNA.576-201ENST00000384781 102 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 SOD2P1-201ENST00000396543 562 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 UBE2V1P2-201ENST00000397758 440 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 AL133270.1-201ENST00000402635 279 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 RNA5SP146-201ENST00000410743 123 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 RN7SKP100-201ENST00000411258 284 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 RNU6-387P-201ENST00000411331 105 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC090774.1-201ENST00000435925 246 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 RPS23P1-201ENST00000491662 432 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC108078.2-201ENST00000510750 236 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 RNU4-49P-201ENST00000516080 140 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.49□□□□□ -1.69
IRF9Q00978 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.49□□□□□ -1.69
IRF9Q00978 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.49□□□□□ -1.69
IRF9Q00978 SCOCP1-201ENST00000554676 349 ntBASIC4.49□□□□□ -1.69
IRF9Q00978 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.49□□□□□ -1.69
IRF9Q00978 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms