Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.09□□□□□ -2.24
HSPG2P98160 NIFKP8-201ENST00000560500 874 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC103987.3-201ENST00000582071 292 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.09□□□□□ -2.24
HSPG2P98160 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
HSPG2P98160 ZNF876P-202ENST00000398732 1485 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC008568.2-201ENST00000623862 2313 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC005336.3-201ENST00000623833 2679 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 SNORA7.1-201ENST00000363750 139 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.08□□□□□ -2.24
HSPG2P98160 ATP5F1P1-201ENST00000433775 569 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.08□□□□□ -2.24
HSPG2P98160 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
HSPG2P98160 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.08□□□□□ -2.24
HSPG2P98160 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.08□□□□□ -2.24
HSPG2P98160 AC015720.1-201ENST00000565251 277 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 RN7SL793P-201ENST00000583259 296 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC017076.1-201ENST00000607613 578 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 VN1R7P-201ENST00000619242 903 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 SRIP3-201ENST00000413200 219 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 RWDD4P2-201ENST00000426392 563 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 USP9YP10-201ENST00000454868 628 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AMD1P1-201ENST00000457220 922 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 RWDD4P1-201ENST00000488019 565 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC093767.1-201ENST00000504523 156 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC103810.1-201ENST00000579873 453 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC136443.5-201ENST00000603741 370 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AP000553.5-201ENST00000641933 54 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
HSPG2P98160 RNU6-60P-201ENST00000364792 103 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 SNORD48-201ENST00000364953 64 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 TAS2R15P-201ENST00000390674 928 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.08□□□□□ -2.24
HSPG2P98160 USP9YP27-201ENST00000418455 438 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.08□□□□□ -2.24
HSPG2P98160 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.08□□□□□ -2.24
HSPG2P98160 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.08□□□□□ -2.24
HSPG2P98160 MYL12BP1-201ENST00000569826 507 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 MIR3670-2-201ENST00000582974 65 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 MIR3670-1-201ENST00000584160 65 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 MIR3670-3-201ENST00000584855 65 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC023043.3-201ENST00000593113 385 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 MIR3670-4-201ENST00000612260 65 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HSPG2P98160 DDX10P1-201ENST00000448545 1933 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 SNORA31-201ENST00000362607 130 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 RNU1-22P-201ENST00000363334 158 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.08□□□□□ -2.24
HSPG2P98160 HMGB1P13-201ENST00000406019 642 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AL035411.2-201ENST00000604022 421 ntBASIC1.08□□□□□ -2.24
HSPG2P98160 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.08□□□□□ -2.24
HSPG2P98160 RNU1-139P-201ENST00000391307 165 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
HSPG2P98160 TPMTP3-201ENST00000411928 735 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.07□□□□□ -2.24
HSPG2P98160 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.07□□□□□ -2.24
HSPG2P98160 AC244505.4-201ENST00000434905 287 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 SSXP5-201ENST00000443473 287 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.07□□□□□ -2.24
HSPG2P98160 AL513331.1-201ENST00000411908 397 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.07□□□□□ -2.24
HSPG2P98160 KATNBL1P3-201ENST00000443475 909 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AIG1P1-201ENST00000503376 148 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.07□□□□□ -2.24
HSPG2P98160 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
HSPG2P98160 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HSPG2P98160 Y_RNA.68-201ENST00000362881 102 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 Y_RNA.458-201ENST00000384240 102 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 PAICSP7-201ENST00000419829 962 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AC109464.2-201ENST00000510242 943 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.07□□□□□ -2.24
HSPG2P98160 AP005137.2-201ENST00000609238 400 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 MIR7973-1-201ENST00000614683 76 ntBASIC1.07□□□□□ -2.24
HSPG2P98160 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.06□□□□□ -2.24
HSPG2P98160 SNORA62.2-201ENST00000364672 152 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 MTND4P13-201ENST00000402078 1023 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 HMGB3P2-201ENST00000411913 584 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 TOMM22P1-201ENST00000418578 312 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 EIF1AXP1-201ENST00000419267 435 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 AC009961.3-201ENST00000449832 765 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 CFTRP1-201ENST00000456646 183 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.06□□□□□ -2.24
HSPG2P98160 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.06□□□□□ -2.24
HSPG2P98160 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.06□□□□□ -2.24
HSPG2P98160 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.06□□□□□ -2.24
HSPG2P98160 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.06□□□□□ -2.24
HSPG2P98160 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HSPG2P98160 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
HSPG2P98160 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 AC007687.1-201ENST00000602704 304 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HSPG2P98160 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HSPG2P98160 AC110774.1-201ENST00000623567 2018 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.06□□□□□ -2.24
HSPG2P98160 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
HSPG2P98160 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.06□□□□□ -2.24
HSPG2P98160 BNIP3P2-201ENST00000441221 577 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms