Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CR848007.1-201ENST00000442354 1699 ntBASIC3.85□□□□□ -1.79
RAE1P78406 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.85□□□□□ -1.79
RAE1P78406 U3.11-201ENST00000364476 212 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAE1P78406 RNU6-432P-201ENST00000384196 109 ntBASIC3.85□□□□□ -1.79
RAE1P78406 RNU6-754P-201ENST00000391166 107 ntBASIC3.85□□□□□ -1.79
RAE1P78406 RPS4XP8-201ENST00000402039 771 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AL583834.1-201ENST00000406943 343 ntBASIC3.85□□□□□ -1.79
RAE1P78406 RN7SKP285-201ENST00000410137 318 ntBASIC3.85□□□□□ -1.79
RAE1P78406 USP9YP6-201ENST00000413550 854 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.85□□□□□ -1.79
RAE1P78406 USP9YP27-201ENST00000418455 438 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.85□□□□□ -1.79
RAE1P78406 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.85□□□□□ -1.79
RAE1P78406 MTCO3P18-201ENST00000440206 761 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.85□□□□□ -1.79
RAE1P78406 NDUFS5P3-201ENST00000450668 321 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC234775.1-201ENST00000454247 670 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC007967.1-201ENST00000455422 1159 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC022364.2-201ENST00000457963 554 ntBASIC3.85□□□□□ -1.79
RAE1P78406 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.85□□□□□ -1.79
RAE1P78406 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.85□□□□□ -1.79
RAE1P78406 SCARNA24.1-201ENST00000516465 137 ntBASIC3.85□□□□□ -1.79
RAE1P78406 Y_RNA.704-201ENST00000516851 102 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.85□□□□□ -1.79
RAE1P78406 AP003730.1-201ENST00000524605 285 ntBASIC3.85□□□□□ -1.79
RAE1P78406 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.85□□□□□ -1.79
RAE1P78406 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.85□□□□□ -1.79
RAE1P78406 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.85□□□□□ -1.79
RAE1P78406 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.85□□□□□ -1.79
RAE1P78406 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
RAE1P78406 MIR548S-201ENST00000581352 82 ntBASIC3.85□□□□□ -1.79
RAE1P78406 MIR6130-201ENST00000619419 109 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC005609.4-201ENST00000625071 447 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.85□□□□□ -1.79
RAE1P78406 MIR7641-1-201ENST00000627518 61 ntBASIC3.85□□□□□ -1.79
RAE1P78406 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.85□□□□□ -1.79
RAE1P78406 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAE1P78406 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RAE1P78406 AC087190.4-201ENST00000574616 8334 ntBASIC3.85□□□□□ -1.79
RAE1P78406 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.85□□□□□ -1.79
RAE1P78406 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
RAE1P78406 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 AL136964.1-201ENST00000622038 2990 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AL645937.1-201ENST00000641739 1652 ntBASIC3.84□□□□□ -1.79
RAE1P78406 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.84□□□□□ -1.79
RAE1P78406 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.84□□□□□ -1.79
RAE1P78406 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RAE1P78406 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RAE1P78406 AC126755.2-208ENST00000327792 462 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AC138969.1-213ENST00000331436 462 ntBASIC3.84□□□□□ -1.79
RAE1P78406 RNU6-1120P-201ENST00000362988 108 ntBASIC3.84□□□□□ -1.79
RAE1P78406 RNU6-511P-201ENST00000363496 107 ntBASIC3.84□□□□□ -1.79
RAE1P78406 RNU6-1322P-201ENST00000364309 107 ntBASIC3.84□□□□□ -1.79
RAE1P78406 RNY3P14-201ENST00000384309 102 ntBASIC3.84□□□□□ -1.79
RAE1P78406 RNU6-278P-201ENST00000390945 109 ntBASIC3.84□□□□□ -1.79
RAE1P78406 LAP3P1-201ENST00000403648 294 ntBASIC3.84□□□□□ -1.79
RAE1P78406 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
RAE1P78406 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 AL807761.1-201ENST00000417622 171 ntBASIC3.84□□□□□ -1.79
RAE1P78406 MTCO1P20-201ENST00000425366 358 ntBASIC3.84□□□□□ -1.79
RAE1P78406 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.84□□□□□ -1.79
RAE1P78406 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.84□□□□□ -1.79
RAE1P78406 AC140076.1-201ENST00000449897 361 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AL451050.1-201ENST00000450126 415 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 AL049714.1-201ENST00000466686 347 ntBASIC3.84□□□□□ -1.79
RAE1P78406 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 HMGN1P28-201ENST00000521340 364 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.84□□□□□ -1.79
RAE1P78406 DYNLL1P4-201ENST00000549314 266 ntBASIC3.84□□□□□ -1.79
RAE1P78406 GNRHR2P1-201ENST00000555315 631 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.84□□□□□ -1.79
RAE1P78406 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 OR4K8P-201ENST00000578842 1048 ntBASIC3.84□□□□□ -1.79
RAE1P78406 IPO5P1-202ENST00000600039 287 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AC007621.1-201ENST00000604544 437 ntBASIC3.84□□□□□ -1.79
RAE1P78406 ARF4P1-201ENST00000605447 541 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AC128687.2-201ENST00000609657 566 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AC093838.1-201ENST00000613014 469 ntBASIC3.84□□□□□ -1.79
RAE1P78406 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.84□□□□□ -1.79
RAE1P78406 AL603758.1-201ENST00000618654 241 ntBASIC3.84□□□□□ -1.79
RAE1P78406 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
RAE1P78406 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAE1P78406 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms