Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR5694-201ENST00000581190 76 ntBASIC2.6□□□□□ -1.99
TPM4P67936 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM4P67936 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM4P67936 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM4P67936 ATP1B3P1-201ENST00000605365 821 ntBASIC2.6□□□□□ -1.99
TPM4P67936 BX322635.1-201ENST00000605804 496 ntBASIC2.6□□□□□ -1.99
TPM4P67936 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM4P67936 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM4P67936 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TPM4P67936 AC016717.2-201ENST00000609089 5141 ntBASIC2.6□□□□□ -1.99
TPM4P67936 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TPM4P67936 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
TPM4P67936 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM4P67936 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TPM4P67936 RNU6-461P-201ENST00000364195 107 ntBASIC2.59□□□□□ -1.99
TPM4P67936 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TPM4P67936 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
TPM4P67936 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
TPM4P67936 RNA5SP354-201ENST00000391247 136 ntBASIC2.59□□□□□ -1.99
TPM4P67936 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.59□□□□□ -1.99
TPM4P67936 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM4P67936 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.59□□□□□ -1.99
TPM4P67936 PNRC2P1-201ENST00000423940 420 ntBASIC2.59□□□□□ -1.99
TPM4P67936 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM4P67936 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM4P67936 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TPM4P67936 DPPA3P1-201ENST00000448050 469 ntBASIC2.59□□□□□ -1.99
TPM4P67936 OR52A4P-202ENST00000481634 799 ntBASIC2.59□□□□□ -1.99
TPM4P67936 AC011825.1-201ENST00000484967 388 ntBASIC2.59□□□□□ -1.99
TPM4P67936 OR52A4P-203ENST00000498233 1014 ntBASIC2.59□□□□□ -1.99
TPM4P67936 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM4P67936 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.59□□□□□ -1.99
TPM4P67936 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM4P67936 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM4P67936 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
TPM4P67936 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.59□□□□□ -1.99
TPM4P67936 AC121758.2-201ENST00000553271 193 ntBASIC2.59□□□□□ -1.99
TPM4P67936 AC090888.1-201ENST00000561335 1141 ntBASIC2.59□□□□□ -1.99
TPM4P67936 HMGB1P6-201ENST00000569046 646 ntBASIC2.59□□□□□ -1.99
TPM4P67936 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.59□□□□□ -1.99
TPM4P67936 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.59□□□□□ -1.99
TPM4P67936 AL022099.1-201ENST00000604551 712 ntBASIC2.59□□□□□ -1.99
TPM4P67936 UCA1.1-201ENST00000620952 75 ntBASIC2.59□□□□□ -1.99
TPM4P67936 SDAD1P2-201ENST00000441308 2028 ntBASIC2.59□□□□□ -2
TPM4P67936 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TPM4P67936 RNU1-105P-201ENST00000363470 161 ntBASIC2.58□□□□□ -2
TPM4P67936 SNORA67.1-201ENST00000364749 141 ntBASIC2.58□□□□□ -2
TPM4P67936 SNORA51.11-201ENST00000384442 131 ntBASIC2.58□□□□□ -2
TPM4P67936 MIR34A-201ENST00000385130 110 ntBASIC2.58□□□□□ -2
TPM4P67936 RNU6-1197P-201ENST00000391183 107 ntBASIC2.58□□□□□ -2
TPM4P67936 AL591416.1-201ENST00000404015 867 ntBASIC2.58□□□□□ -2
TPM4P67936 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
TPM4P67936 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TPM4P67936 AC019097.1-201ENST00000424783 735 ntBASIC2.58□□□□□ -2
TPM4P67936 MORF4L1P7-201ENST00000426038 703 ntBASIC2.58□□□□□ -2
TPM4P67936 RPL7L1P10-201ENST00000427790 463 ntBASIC2.58□□□□□ -2
TPM4P67936 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.58□□□□□ -2
TPM4P67936 AC092573.2-201ENST00000434546 243 ntBASIC2.58□□□□□ -2
TPM4P67936 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.58□□□□□ -2
TPM4P67936 ARPC3P1-201ENST00000437218 533 ntBASIC2.58□□□□□ -2
TPM4P67936 ELOCP3-201ENST00000439303 348 ntBASIC2.58□□□□□ -2
TPM4P67936 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.58□□□□□ -2
TPM4P67936 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.58□□□□□ -2
TPM4P67936 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
TPM4P67936 RNU6-27P-201ENST00000516146 107 ntBASIC2.58□□□□□ -2
TPM4P67936 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.58□□□□□ -2
TPM4P67936 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.58□□□□□ -2
TPM4P67936 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.58□□□□□ -2
TPM4P67936 NRBF2P5-201ENST00000603087 788 ntBASIC2.58□□□□□ -2
TPM4P67936 AL161756.2-201ENST00000604597 246 ntBASIC2.58□□□□□ -2
TPM4P67936 AL121917.1-203ENST00000605534 577 ntBASIC2.58□□□□□ -2
TPM4P67936 AP000254.1-201ENST00000609934 520 ntBASIC2.58□□□□□ -2
TPM4P67936 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.58□□□□□ -2
TPM4P67936 AC079597.1-201ENST00000624306 508 ntBASIC2.58□□□□□ -2
TPM4P67936 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.57□□□□□ -2
TPM4P67936 TPTE2P4-201ENST00000258589 1605 ntBASIC2.57□□□□□ -2
TPM4P67936 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.57□□□□□ -2
TPM4P67936 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TPM4P67936 CR848007.1-201ENST00000442354 1699 ntBASIC2.57□□□□□ -2
TPM4P67936 AC008568.2-201ENST00000623862 2313 ntBASIC2.57□□□□□ -2
TPM4P67936 RNA5SP37-201ENST00000365420 130 ntBASIC2.57□□□□□ -2
TPM4P67936 AL023807.1-201ENST00000407932 359 ntBASIC2.57□□□□□ -2
TPM4P67936 UBE2V1P11-201ENST00000411559 285 ntBASIC2.57□□□□□ -2
TPM4P67936 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.57□□□□□ -2
TPM4P67936 KRR1P1-201ENST00000419430 803 ntBASIC2.57□□□□□ -2
TPM4P67936 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.57□□□□□ -2
TPM4P67936 OR4K11P-201ENST00000431829 904 ntBASIC2.57□□□□□ -2
TPM4P67936 AC000041.1-201ENST00000439655 175 ntBASIC2.57□□□□□ -2
TPM4P67936 AL445687.1-201ENST00000439946 251 ntBASIC2.57□□□□□ -2
TPM4P67936 WASF1P1-201ENST00000447560 1131 ntBASIC2.57□□□□□ -2
TPM4P67936 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.57□□□□□ -2
TPM4P67936 snoU13.28-201ENST00000459235 104 ntBASIC2.57□□□□□ -2
TPM4P67936 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.57□□□□□ -2
TPM4P67936 RBM43P1-201ENST00000476891 1081 ntBASIC2.57□□□□□ -2
TPM4P67936 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.57□□□□□ -2
TPM4P67936 AC080014.1-201ENST00000496877 1201 ntBASIC2.57□□□□□ -2
TPM4P67936 GTF2IP9-201ENST00000502460 301 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms