Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RPS3AP61247 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.65□□□□□ -1.83
RPS3AP61247 AC090740.1-201ENST00000623193 2262 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 SNORA23-201ENST00000365128 182 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 RNU5E-5P-201ENST00000365379 116 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 SNORA36C-201ENST00000384289 132 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.64□□□□□ -1.83
RPS3AP61247 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.64□□□□□ -1.83
RPS3AP61247 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.64□□□□□ -1.83
RPS3AP61247 RPL31P12-201ENST00000422587 358 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.64□□□□□ -1.83
RPS3AP61247 AL353777.1-201ENST00000425552 326 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AC244035.1-201ENST00000430042 390 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.64□□□□□ -1.83
RPS3AP61247 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.64□□□□□ -1.83
RPS3AP61247 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.64□□□□□ -1.83
RPS3AP61247 AL590365.1-201ENST00000450788 243 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPS3AP61247 AC004069.2-201ENST00000505438 1114 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.64□□□□□ -1.83
RPS3AP61247 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.64□□□□□ -1.83
RPS3AP61247 AL845331.3-202ENST00000562856 261 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AC012065.4-201ENST00000602445 679 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AC067959.1-201ENST00000604334 379 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AL359999.1-201ENST00000604513 294 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 TUG1_2.1-201ENST00000614234 87 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 AC009159.1-201ENST00000618386 642 ntBASIC3.64□□□□□ -1.83
RPS3AP61247 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPS3AP61247 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.64□□□□□ -1.83
RPS3AP61247 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPS3AP61247 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.63□□□□□ -1.83
RPS3AP61247 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RPS3AP61247 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RPS3AP61247 RNA5SP295-201ENST00000362655 121 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 RNU5A-8P-201ENST00000364102 114 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 PTMAP5-201ENST00000393073 333 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 U3.42-201ENST00000408746 214 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.63□□□□□ -1.83
RPS3AP61247 CYCSP46-201ENST00000423569 204 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 UBE2D3P2-201ENST00000424409 445 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AL358472.1-201ENST00000431295 329 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 AC098826.1-201ENST00000433943 471 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 AC129850.1-201ENST00000436203 508 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 RPL21P89-201ENST00000444021 467 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 Z83846.1-201ENST00000446798 265 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.63□□□□□ -1.83
RPS3AP61247 SNRPFP4-201ENST00000456366 242 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 RPL23AP62-201ENST00000463396 453 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 AL049714.1-201ENST00000466686 347 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 RPS15AP36-201ENST00000492022 382 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 ZNF519P3-201ENST00000557158 1032 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 AL356432.3-201ENST00000568952 465 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.63□□□□□ -1.83
RPS3AP61247 ZNF415P1-201ENST00000582279 1166 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.63□□□□□ -1.83
RPS3AP61247 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 AL606490.9-201ENST00000603331 271 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AL390240.1-201ENST00000612950 384 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC104010.1-201ENST00000616889 150 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC073530.2-201ENST00000623987 261 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.63□□□□□ -1.83
RPS3AP61247 RNA5SP196-201ENST00000625967 102 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC025048.6-202ENST00000627667 438 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPS3AP61247 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.63□□□□□ -1.83
RPS3AP61247 AC138915.3-201ENST00000562908 1389 ntBASIC3.63□□□□□ -1.83
RPS3AP61247 AC008568.2-201ENST00000623862 2313 ntBASIC3.62□□□□□ -1.83
RPS3AP61247 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPS3AP61247 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms