Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC136443.5-201ENST00000603741 370 ntBASIC5.06□□□□□ -1.6
RTP1P59025 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AL122125.1-201ENST00000616999 600 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.06□□□□□ -1.6
RTP1P59025 AC040168.1-201ENST00000623594 991 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AC067931.1-201ENST00000624190 671 ntBASIC5.06□□□□□ -1.6
RTP1P59025 CYP3A51P-201ENST00000633513 256 ntBASIC5.06□□□□□ -1.6
RTP1P59025 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTP1P59025 Z95327.2-201ENST00000414579 1873 ntBASIC5.06□□□□□ -1.6
RTP1P59025 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RTP1P59025 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTP1P59025 MTND5P16-201ENST00000460269 1703 ntBASIC5.06□□□□□ -1.6
RTP1P59025 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTP1P59025 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTP1P59025 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTP1P59025 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 RNU1-132P-201ENST00000364300 164 ntBASIC5.05□□□□□ -1.6
RTP1P59025 Y_RNA.367-201ENST00000365544 101 ntBASIC5.05□□□□□ -1.6
RTP1P59025 RNA5SP283-201ENST00000365604 119 ntBASIC5.05□□□□□ -1.6
RTP1P59025 SNORD116-29-201ENST00000384516 83 ntBASIC5.05□□□□□ -1.6
RTP1P59025 SNORD37.1-201ENST00000390968 65 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AL024474.1-201ENST00000404655 591 ntBASIC5.05□□□□□ -1.6
RTP1P59025 RN7SKP235-201ENST00000410662 305 ntBASIC5.05□□□□□ -1.6
RTP1P59025 RNU6-193P-201ENST00000410977 107 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.05□□□□□ -1.6
RTP1P59025 Z74021.1-201ENST00000423610 407 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.05□□□□□ -1.6
RTP1P59025 RPS20P5-201ENST00000434808 360 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.05□□□□□ -1.6
RTP1P59025 AC114495.1-201ENST00000441274 436 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AL590639.1-201ENST00000456484 337 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AL163540.1-201ENST00000485382 386 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.05□□□□□ -1.6
RTP1P59025 RNU6-559P-201ENST00000516151 98 ntBASIC5.05□□□□□ -1.6
RTP1P59025 Y_RNA.665-201ENST00000516177 98 ntBASIC5.05□□□□□ -1.6
RTP1P59025 Y_RNA.718-201ENST00000517110 102 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.05□□□□□ -1.6
RTP1P59025 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.05□□□□□ -1.6
RTP1P59025 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.05□□□□□ -1.6
RTP1P59025 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.05□□□□□ -1.6
RTP1P59025 AL355836.1-201ENST00000555951 870 ntBASIC5.05□□□□□ -1.6
RTP1P59025 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.05□□□□□ -1.6
RTP1P59025 AC105224.1-201ENST00000587055 421 ntBASIC5.05□□□□□ -1.6
RTP1P59025 POLR3GP2-201ENST00000588366 668 ntBASIC5.05□□□□□ -1.6
RTP1P59025 HMGB2P1-201ENST00000591146 634 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AC084781.2-201ENST00000615568 161 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.05□□□□□ -1.6
RTP1P59025 AP001005.3-201ENST00000622049 129 ntBASIC5.05□□□□□ -1.6
RTP1P59025 MTND4LP32-201ENST00000636111 270 ntBASIC5.05□□□□□ -1.6
RTP1P59025 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RTP1P59025 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RTP1P59025 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.05□□□□□ -1.6
RTP1P59025 XPOTP1-201ENST00000443317 2398 ntBASIC5.05□□□□□ -1.6
RTP1P59025 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTP1P59025 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTP1P59025 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 OR5P1P-201ENST00000299512 925 ntBASIC5.04□□□□□ -1.6
RTP1P59025 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 MIR208A-201ENST00000362287 71 ntBASIC5.04□□□□□ -1.6
RTP1P59025 Y_RNA.459-201ENST00000384251 102 ntBASIC5.04□□□□□ -1.6
RTP1P59025 RNU6-39P-201ENST00000384344 107 ntBASIC5.04□□□□□ -1.6
RTP1P59025 RNU4-26P-201ENST00000410270 107 ntBASIC5.04□□□□□ -1.6
RTP1P59025 AC245054.2-201ENST00000415639 319 ntBASIC5.04□□□□□ -1.6
RTP1P59025 BEND7P1-201ENST00000422058 457 ntBASIC5.04□□□□□ -1.6
RTP1P59025 OR4K11P-201ENST00000431829 904 ntBASIC5.04□□□□□ -1.6
RTP1P59025 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 NANOGP10-201ENST00000453325 895 ntBASIC5.04□□□□□ -1.6
RTP1P59025 RNU6-1218P-201ENST00000458990 108 ntBASIC5.04□□□□□ -1.6
RTP1P59025 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP1P59025 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.04□□□□□ -1.6
RTP1P59025 AC004062.1-201ENST00000509926 645 ntBASIC5.04□□□□□ -1.6
RTP1P59025 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP1P59025 HMGB1P19-201ENST00000517578 577 ntBASIC5.04□□□□□ -1.6
RTP1P59025 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP1P59025 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP1P59025 OR4K8P-201ENST00000578842 1048 ntBASIC5.04□□□□□ -1.6
RTP1P59025 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.04□□□□□ -1.6
RTP1P59025 AC068790.3-201ENST00000602988 553 ntBASIC5.04□□□□□ -1.6
RTP1P59025 AL627309.6-201ENST00000606857 840 ntBASIC5.04□□□□□ -1.6
RTP1P59025 AL022345.1-201ENST00000607292 135 ntBASIC5.04□□□□□ -1.6
RTP1P59025 OR6R2P-201ENST00000609216 300 ntBASIC5.04□□□□□ -1.6
RTP1P59025 uc_338.12-201ENST00000616344 181 ntBASIC5.04□□□□□ -1.6
RTP1P59025 MFSD8-242ENST00000641690 4199 ntBASIC5.04□□□□□ -1.6
RTP1P59025 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.04□□□□□ -1.6
RTP1P59025 CPHL1P-201ENST00000461341 3407 ntBASIC5.04□□□□□ -1.6
RTP1P59025 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTP1P59025 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms