Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC010486.2-201ENST00000505572 483 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC111000.2-201ENST00000507775 550 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC022690.1-201ENST00000526681 550 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AL133271.1-201ENST00000538229 291 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDL3P58872 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDL3P58872 AC090888.1-201ENST00000561335 1141 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.39□□□□□ -1.71
RHBDL3P58872 AC068313.1-201ENST00000604028 1008 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.39□□□□□ -1.71
RHBDL3P58872 AP000254.1-201ENST00000609934 520 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC013476.2-201ENST00000614456 459 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AC008121.2-201ENST00000614647 523 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AF246928.1-201ENST00000623768 87 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AP000553.6-201ENST00000641242 118 ntBASIC4.39□□□□□ -1.71
RHBDL3P58872 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDL3P58872 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDL3P58872 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDL3P58872 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDL3P58872 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RHBDL3P58872 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RHBDL3P58872 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
RHBDL3P58872 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDL3P58872 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDL3P58872 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RHBDL3P58872 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RHBDL3P58872 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDL3P58872 SNORA1.3-201ENST00000384676 136 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 MIR34B-201ENST00000385076 84 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL109755.1-201ENST00000401791 649 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL031577.2-201ENST00000404133 280 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 U3.42-201ENST00000408746 214 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AC008850.1-201ENST00000427546 362 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDL3P58872 MTATP6P17-201ENST00000431030 672 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDL3P58872 LARP1BP3-201ENST00000437229 869 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL512286.1-201ENST00000439244 400 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDL3P58872 TPT1P14-201ENST00000448018 505 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL162389.1-201ENST00000449233 177 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AL136097.1-201ENST00000456945 913 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 RNU7-59P-201ENST00000459101 61 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 TRBV12-2-201ENST00000489763 344 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AP000563.1-201ENST00000490865 758 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AC135721.1-201ENST00000497954 479 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AC116347.2-201ENST00000514912 523 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 SNORA70.18-201ENST00000516696 98 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AC008489.1-201ENST00000524271 483 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AP000907.2-201ENST00000530827 353 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 OR4T1P-201ENST00000554933 911 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDL3P58872 AC008638.3-201ENST00000603341 463 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 AC009570.1-201ENST00000609599 745 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 Z99129.2-201ENST00000619967 314 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 PLCE1P1-201ENST00000622094 305 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RHBDL3P58872 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDL3P58872 AL445523.1-201ENST00000451184 1362 ntBASIC4.38□□□□□ -1.71
RHBDL3P58872 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RHBDL3P58872 MTCO1P12-201ENST00000414273 1543 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 SNORA23-201ENST00000365128 182 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 HLFP1-201ENST00000402375 499 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 MTND2P18-201ENST00000419962 1030 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDL3P58872 RPL21P109-201ENST00000422213 475 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 UBE2D3P2-201ENST00000424409 445 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AL365184.2-201ENST00000431139 435 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AC092641.1-201ENST00000440229 772 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 MTND1P30-201ENST00000441241 901 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDL3P58872 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDL3P58872 RBMY2UP-201ENST00000453474 324 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDL3P58872 AC112198.1-201ENST00000505369 1220 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 RNU6-1003P-201ENST00000517099 105 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.37□□□□□ -1.71
RHBDL3P58872 SUMO2P20-201ENST00000520803 283 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDL3P58872 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDL3P58872 AL109653.1-201ENST00000603091 248 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AC010591.1-201ENST00000603941 649 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AL161756.2-201ENST00000604597 246 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.37□□□□□ -1.71
RHBDL3P58872 AC103710.1-201ENST00000610003 901 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDL3P58872 MIR6076-201ENST00000617521 113 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AC093591.3-201ENST00000634516 308 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms