Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC017015.1-201ENST00000477387 286 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC108729.1-201ENST00000487812 947 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.87□□□□□ -1.95
LIM2P55344 MLLT10P2-201ENST00000506434 249 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC021146.8-201ENST00000507455 733 ntBASIC2.87□□□□□ -1.95
LIM2P55344 KLHL2P1-201ENST00000508691 521 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.87□□□□□ -1.95
LIM2P55344 RNU6-415P-201ENST00000516252 97 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC105185.1-201ENST00000518705 535 ntBASIC2.87□□□□□ -1.95
LIM2P55344 COX6CP8-201ENST00000522620 226 ntBASIC2.87□□□□□ -1.95
LIM2P55344 PSMA2P1-201ENST00000526365 646 ntBASIC2.87□□□□□ -1.95
LIM2P55344 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LIM2P55344 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LIM2P55344 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.87□□□□□ -1.95
LIM2P55344 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.87□□□□□ -1.95
LIM2P55344 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LIM2P55344 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.87□□□□□ -1.95
LIM2P55344 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.87□□□□□ -1.95
LIM2P55344 AL391156.1-201ENST00000554965 554 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.87□□□□□ -1.95
LIM2P55344 AP001029.3-201ENST00000588063 596 ntBASIC2.87□□□□□ -1.95
LIM2P55344 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.87□□□□□ -1.95
LIM2P55344 AC091057.2-201ENST00000602594 792 ntBASIC2.87□□□□□ -1.95
LIM2P55344 DUXAP11-201ENST00000603858 526 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC011468.4-201ENST00000603942 409 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AL390208.1-201ENST00000605885 644 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC080013.3-201ENST00000606839 578 ntBASIC2.87□□□□□ -1.95
LIM2P55344 AC013470.4-201ENST00000619978 986 ntBASIC2.87□□□□□ -1.95
LIM2P55344 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.87□□□□□ -1.95
LIM2P55344 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
LIM2P55344 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.87□□□□□ -1.95
LIM2P55344 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LIM2P55344 MTND5P19-201ENST00000424872 1794 ntBASIC2.87□□□□□ -1.95
LIM2P55344 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
LIM2P55344 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.86□□□□□ -1.95
LIM2P55344 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LIM2P55344 OR5H2-201ENST00000355273 945 ntBASIC2.86□□□□□ -1.95
LIM2P55344 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LIM2P55344 RNU6-28P-201ENST00000362378 107 ntBASIC2.86□□□□□ -1.95
LIM2P55344 SNORA71.1-201ENST00000364523 117 ntBASIC2.86□□□□□ -1.95
LIM2P55344 MIR513B-201ENST00000385136 84 ntBASIC2.86□□□□□ -1.95
LIM2P55344 AL136372.1-201ENST00000403060 228 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RPS15AP38-201ENST00000413110 372 ntBASIC2.86□□□□□ -1.95
LIM2P55344 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIM2P55344 MTCO1P39-201ENST00000426148 480 ntBASIC2.86□□□□□ -1.95
LIM2P55344 MTCO2P20-201ENST00000437339 673 ntBASIC2.86□□□□□ -1.95
LIM2P55344 MTCYBP31-201ENST00000438855 1122 ntBASIC2.86□□□□□ -1.95
LIM2P55344 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AL671855.1-201ENST00000446875 1203 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RSL24D1P3-201ENST00000449255 495 ntBASIC2.86□□□□□ -1.95
LIM2P55344 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.86□□□□□ -1.95
LIM2P55344 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AC104563.1-201ENST00000476147 376 ntBASIC2.86□□□□□ -1.95
LIM2P55344 FAM172BP-201ENST00000487497 1089 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RN7SL283P-201ENST00000489055 303 ntBASIC2.86□□□□□ -1.95
LIM2P55344 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AC104090.1-201ENST00000506341 1171 ntBASIC2.86□□□□□ -1.95
LIM2P55344 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.86□□□□□ -1.95
LIM2P55344 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.86□□□□□ -1.95
LIM2P55344 RN7SKP43-201ENST00000516173 320 ntBASIC2.86□□□□□ -1.95
LIM2P55344 SNORA31.8-201ENST00000516327 108 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RNU5A-4P-201ENST00000516588 111 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RN7SKP272-201ENST00000516988 232 ntBASIC2.86□□□□□ -1.95
LIM2P55344 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.86□□□□□ -1.95
LIM2P55344 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIM2P55344 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AC024224.1-201ENST00000538284 609 ntBASIC2.86□□□□□ -1.95
LIM2P55344 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.86□□□□□ -1.95
LIM2P55344 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.86□□□□□ -1.95
LIM2P55344 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.86□□□□□ -1.95
LIM2P55344 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIM2P55344 AC006539.2-201ENST00000601729 572 ntBASIC2.86□□□□□ -1.95
LIM2P55344 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.86□□□□□ -1.95
LIM2P55344 U6.98-201ENST00000637157 84 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LIM2P55344 TAB3P1-202ENST00000452645 1634 ntBASIC2.86□□□□□ -1.95
LIM2P55344 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LIM2P55344 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 AC090740.1-201ENST00000623193 2262 ntBASIC2.85□□□□□ -1.95
LIM2P55344 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LIM2P55344 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIM2P55344 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 AC008264.2-201ENST00000610193 3731 ntBASIC2.85□□□□□ -1.95
LIM2P55344 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 FAM133CP-201ENST00000332869 704 ntBASIC2.85□□□□□ -1.95
LIM2P55344 MIR422A-201ENST00000362286 90 ntBASIC2.85□□□□□ -1.95
LIM2P55344 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 RNU6-328P-201ENST00000390887 106 ntBASIC2.85□□□□□ -1.95
LIM2P55344 EI24P2-201ENST00000397776 1076 ntBASIC2.85□□□□□ -1.95
LIM2P55344 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.85□□□□□ -1.95
LIM2P55344 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 AC007390.1-201ENST00000415722 356 ntBASIC2.85□□□□□ -1.95
LIM2P55344 RPL22P18-201ENST00000417197 377 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms