Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDH13P55290 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
CDH13P55290 DEFB108F-201ENST00000344638 222 ntBASIC3.43□□□□□ -1.86
CDH13P55290 FRG1CP-201ENST00000358464 769 ntBASIC3.43□□□□□ -1.86
CDH13P55290 SNORD9-201ENST00000362566 104 ntBASIC3.43□□□□□ -1.86
CDH13P55290 Y_RNA.97-201ENST00000363094 102 ntBASIC3.43□□□□□ -1.86
CDH13P55290 RN7SKP263-201ENST00000411194 309 ntBASIC3.43□□□□□ -1.86
CDH13P55290 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 AL389915.1-201ENST00000422463 466 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 RPL27AP8-201ENST00000424277 446 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 RPL35AP22-201ENST00000436855 335 ntBASIC3.43□□□□□ -1.86
CDH13P55290 MTND1P26-201ENST00000440488 538 ntBASIC3.43□□□□□ -1.86
CDH13P55290 TXNP1-201ENST00000441872 371 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AL357552.1-201ENST00000445254 415 ntBASIC3.43□□□□□ -1.86
CDH13P55290 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 RPS3AP46-201ENST00000448352 682 ntBASIC3.43□□□□□ -1.86
CDH13P55290 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 AC010468.1-201ENST00000461022 817 ntBASIC3.43□□□□□ -1.86
CDH13P55290 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
CDH13P55290 SETP11-201ENST00000473027 690 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 AC020893.1-201ENST00000502452 580 ntBASIC3.43□□□□□ -1.86
CDH13P55290 UBE2CP3-201ENST00000502715 450 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 HMGB3P15-201ENST00000507326 574 ntBASIC3.43□□□□□ -1.86
CDH13P55290 NPM1P41-201ENST00000512920 831 ntBASIC3.43□□□□□ -1.86
CDH13P55290 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 RN7SKP21-201ENST00000516503 220 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC106038.2-201ENST00000520706 568 ntBASIC3.43□□□□□ -1.86
CDH13P55290 HMGN1P28-201ENST00000521340 364 ntBASIC3.43□□□□□ -1.86
CDH13P55290 MTCO1P47-201ENST00000523889 1271 ntBASIC3.43□□□□□ -1.86
CDH13P55290 DEFB108D-201ENST00000527787 222 ntBASIC3.43□□□□□ -1.86
CDH13P55290 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH13P55290 SYF2P1-201ENST00000550658 413 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC091489.2-201ENST00000566263 604 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC012435.1-202ENST00000568772 240 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC011260.1-201ENST00000578420 472 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 WISP1-OT1-201ENST00000602893 642 ntBASIC3.43□□□□□ -1.86
CDH13P55290 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 AC091965.4-201ENST00000607691 587 ntBASIC3.43□□□□□ -1.86
CDH13P55290 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 AL356266.1-201ENST00000623311 483 ntBASIC3.43□□□□□ -1.86
CDH13P55290 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH13P55290 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH13P55290 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH13P55290 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH13P55290 AC005832.2-201ENST00000538921 1430 ntBASIC3.43□□□□□ -1.86
CDH13P55290 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH13P55290 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH13P55290 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH13P55290 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CDH13P55290 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH13P55290 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDH13P55290 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CDH13P55290 AP002088.1-201ENST00000382740 395 ntBASIC3.42□□□□□ -1.86
CDH13P55290 RNU6-76P-201ENST00000384060 104 ntBASIC3.42□□□□□ -1.86
CDH13P55290 Y_RNA.560-201ENST00000384689 102 ntBASIC3.42□□□□□ -1.86
CDH13P55290 U8.14-201ENST00000390843 143 ntBASIC3.42□□□□□ -1.86
CDH13P55290 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 AL365184.2-201ENST00000431139 435 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH13P55290 LARP1BP3-201ENST00000437229 869 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH13P55290 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH13P55290 AC078785.3-201ENST00000476607 425 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC108860.1-201ENST00000484521 383 ntBASIC3.42□□□□□ -1.86
CDH13P55290 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 AC006499.5-201ENST00000505037 514 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 RANP9-201ENST00000519957 271 ntBASIC3.42□□□□□ -1.86
CDH13P55290 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH13P55290 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH13P55290 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH13P55290 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH13P55290 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH13P55290 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH13P55290 MIR3921-201ENST00000577308 85 ntBASIC3.42□□□□□ -1.86
CDH13P55290 MIR3160-1-201ENST00000577972 85 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC008088.1-201ENST00000580993 280 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH13P55290 AC060771.1-201ENST00000582031 164 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AL357094.1-201ENST00000603845 844 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AL110115.1-201ENST00000614396 364 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC068831.8-201ENST00000620171 435 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AC008443.7-201ENST00000622195 246 ntBASIC3.42□□□□□ -1.86
CDH13P55290 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
CDH13P55290 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH13P55290 AC118273.1-201ENST00000525324 3006 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms