Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHB4P54760 AL590609.2-201ENST00000421430 368 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC233981.1-201ENST00000423224 461 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC091390.3-201ENST00000426478 338 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB4P54760 GPM6BP2-201ENST00000432046 144 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHB4P54760 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHB4P54760 BNIP3P2-201ENST00000441221 577 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 GPM6BP1-201ENST00000446387 144 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 SNORA19.2-201ENST00000516013 114 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 RN7SKP116-201ENST00000516902 319 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC022616.6-201ENST00000520479 119 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC008562.1-201ENST00000521763 330 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 IFITM8P-201ENST00000522529 394 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC020661.2-201ENST00000560114 134 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHB4P54760 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC010205.1-201ENST00000616668 449 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 AC009248.2-201ENST00000619826 254 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
EPHB4P54760 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB4P54760 AC010149.2-201ENST00000637608 315 ntBASIC4.8□□□□□ -1.64
EPHB4P54760 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB4P54760 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB4P54760 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB4P54760 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB4P54760 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 ERCC6-202ENST00000374127 1782 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 AL512646.1-201ENST00000269395 1077 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 RNU6-223P-201ENST00000362830 107 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 SNORA73.2-201ENST00000364946 201 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 SNORA32.2-201ENST00000384049 122 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 SNORA9-201ENST00000384215 133 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 MIR3065-201ENST00000390137 79 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 RPL7P25-201ENST00000404151 721 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 HLA-N-201ENST00000437516 135 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AL353748.1-201ENST00000440753 474 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHB4P54760 AL133547.1-201ENST00000448546 220 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC006480.1-201ENST00000449887 378 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC005229.2-201ENST00000456995 399 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 RPS15AP1-201ENST00000457423 391 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 snoU13.24-201ENST00000458998 104 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
EPHB4P54760 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHB4P54760 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHB4P54760 RNU6-347P-201ENST00000516658 105 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.79□□□□□ -1.64
EPHB4P54760 AC124068.1-201ENST00000563131 678 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC005668.1-201ENST00000571142 476 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC099489.2-201ENST00000574976 260 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.79□□□□□ -1.64
EPHB4P54760 PSMA6P4-201ENST00000603247 718 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AL133215.3-201ENST00000609801 448 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHB4P54760 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 uc_338.9-201ENST00000617424 182 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
EPHB4P54760 AC079684.1-201ENST00000621405 437 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 C2orf27A-204ENST00000623058 969 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 AC091905.2-201ENST00000623143 306 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
EPHB4P54760 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EPHB4P54760 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB4P54760 AL118496.1-201ENST00000440201 1812 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
EPHB4P54760 DDX18P3-201ENST00000404856 2007 ntBASIC4.79□□□□□ -1.64
EPHB4P54760 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
EPHB4P54760 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB4P54760 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
EPHB4P54760 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB4P54760 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
EPHB4P54760 RNU5E-1-201ENST00000362477 120 ntBASIC4.78□□□□□ -1.64
EPHB4P54760 Y_RNA.216-201ENST00000364205 93 ntBASIC4.78□□□□□ -1.64
EPHB4P54760 RNU6-74P-201ENST00000384235 107 ntBASIC4.78□□□□□ -1.64
EPHB4P54760 TXNP7-201ENST00000406296 293 ntBASIC4.78□□□□□ -1.64
EPHB4P54760 MTCO3P46-201ENST00000425787 232 ntBASIC4.78□□□□□ -1.64
EPHB4P54760 COX6B1P7-201ENST00000430845 235 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms