Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCN3P51790 MTCYBP22-201ENST00000603788 447 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC092354.1-201ENST00000606057 376 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 HMGN2P28-201ENST00000606102 262 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC011816.2-201ENST00000607089 556 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC026585.1-201ENST00000619582 524 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 MIR3651-201ENST00000630427 90 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLCN3P51790 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCN3P51790 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CLCN3P51790 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
CLCN3P51790 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCN3P51790 OR11H5P-202ENST00000641612 1325 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 RNU6-1249P-201ENST00000363237 111 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 RNU6-335P-201ENST00000364563 113 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLCN3P51790 RPL7P8-201ENST00000411964 730 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCN3P51790 HMGB1P11-201ENST00000413899 637 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC099677.1-201ENST00000420575 175 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.79□□□□□ -1.8
CLCN3P51790 AL513174.1-201ENST00000423182 629 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC006989.1-201ENST00000427212 131 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCN3P51790 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.79□□□□□ -1.8
CLCN3P51790 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 SKP1P1-201ENST00000438081 489 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 ELOCP30-201ENST00000447108 299 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
CLCN3P51790 snoU13.8-201ENST00000458890 104 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 RPL32P34-201ENST00000486380 400 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCN3P51790 SNORA74D-201ENST00000516404 141 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 MTCYBP20-201ENST00000524239 1129 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 OR4P1P-201ENST00000530808 1136 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AP004247.1-201ENST00000531556 1289 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC026333.2-201ENST00000542164 106 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC037471.2-201ENST00000564941 598 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 PCMTD1P2-201ENST00000565017 355 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC012182.1-201ENST00000570133 895 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC010928.3-201ENST00000587712 541 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC004853.1-201ENST00000604902 698 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC128687.1-201ENST00000605304 619 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCN3P51790 AC084035.1-201ENST00000634543 607 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 CRYM-AS1-204ENST00000637983 556 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLCN3P51790 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
CLCN3P51790 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCN3P51790 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCN3P51790 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCN3P51790 MTND5P29-201ENST00000458676 1807 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCN3P51790 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
CLCN3P51790 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLCN3P51790 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLCN3P51790 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCN3P51790 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 RN7SKP44-201ENST00000363602 316 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 RNU6-289P-201ENST00000364093 107 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 RNU6-777P-201ENST00000364265 104 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 RNU6-660P-201ENST00000364566 109 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 RNA5SP235-201ENST00000365411 114 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCN3P51790 Y_RNA.559-201ENST00000384686 107 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 AL603766.1-201ENST00000407763 664 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 AMD1P2-201ENST00000412936 992 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 CYCSP46-201ENST00000423569 204 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCN3P51790 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCN3P51790 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.78□□□□□ -1.8
CLCN3P51790 MED14P1-201ENST00000430517 648 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCN3P51790 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCN3P51790 RSU1P2-202ENST00000437884 485 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 MTND1P34-201ENST00000438556 671 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 AL831737.1-201ENST00000441288 271 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 COX6CP2-201ENST00000444980 225 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 AP000936.2-201ENST00000447151 681 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCN3P51790 KATNBL1P6-201ENST00000453433 915 ntBASIC3.78□□□□□ -1.8
CLCN3P51790 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCN3P51790 AC017015.1-201ENST00000477387 286 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms