Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FTH1P12-201ENST00000432137 551 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 HMGB1P26-201ENST00000452520 628 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRCA2P51587 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA2P51587 AC068135.2-201ENST00000569293 1028 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA2P51587 AC068944.2-201ENST00000610373 403 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCA2P51587 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
BRCA2P51587 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRCA2P51587 RNA5SP502-201ENST00000362694 119 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.72□□□□□ -2.13
BRCA2P51587 AL022400.1-201ENST00000423946 935 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCA2P51587 AC013444.2-201ENST00000603317 787 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 AC016727.2-201ENST00000603988 621 ntBASIC1.72□□□□□ -2.13
BRCA2P51587 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.71□□□□□ -2.13
BRCA2P51587 NUP58P1-201ENST00000502546 1738 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 RNA5SP257-201ENST00000363023 116 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
BRCA2P51587 AL159169.1-201ENST00000421119 127 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 RNA5SP402-201ENST00000517148 110 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.71□□□□□ -2.14
BRCA2P51587 AL049840.6-202ENST00000603373 279 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 AC083806.3-201ENST00000614016 455 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 AP000553.5-201ENST00000641933 54 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.71□□□□□ -2.14
BRCA2P51587 CALM1P1-201ENST00000442082 433 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 COX6CP14-201ENST00000469580 174 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 AC091544.1-201ENST00000484702 348 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
BRCA2P51587 AC008687.2-201ENST00000597865 520 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 MTCO1P6-201ENST00000481192 1384 ntBASIC1.71□□□□□ -2.14
BRCA2P51587 RN7SKP123-201ENST00000410732 291 ntBASIC1.7□□□□□ -2.14
BRCA2P51587 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.7□□□□□ -2.14
BRCA2P51587 FABP5P6-201ENST00000510588 409 ntBASIC1.7□□□□□ -2.14
BRCA2P51587 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.7□□□□□ -2.14
BRCA2P51587 RNA5SP344-201ENST00000411081 104 ntBASIC1.7□□□□□ -2.14
BRCA2P51587 AC023128.2-201ENST00000420880 1223 ntBASIC1.7□□□□□ -2.14
BRCA2P51587 DYNLL1P5-201ENST00000467158 270 ntBASIC1.7□□□□□ -2.14
BRCA2P51587 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.7□□□□□ -2.14
BRCA2P51587 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
BRCA2P51587 AC093084.1-201ENST00000424233 687 ntBASIC1.7□□□□□ -2.14
BRCA2P51587 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.7□□□□□ -2.14
BRCA2P51587 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCA2P51587 MTCYBP12-201ENST00000440559 1134 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 TRAV28-201ENST00000557548 323 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCA2P51587 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
BRCA2P51587 WWP1P1-201ENST00000466609 2769 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
BRCA2P51587 MIR373-201ENST00000362273 69 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
BRCA2P51587 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 KATNBL1P1-201ENST00000605192 748 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 AL627309.6-201ENST00000606857 840 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCA2P51587 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
BRCA2P51587 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCA2P51587 AL583843.1-201ENST00000456070 346 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 AC096992.1-201ENST00000459808 709 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
BRCA2P51587 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
BRCA2P51587 RPS3AP22-201ENST00000488297 769 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 MTCYBP18-201ENST00000501056 747 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 AC008885.2-201ENST00000509506 930 ntBASIC1.69□□□□□ -2.14
BRCA2P51587 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.68□□□□□ -2.14
BRCA2P51587 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.68□□□□□ -2.14
BRCA2P51587 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.68□□□□□ -2.14
BRCA2P51587 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.68□□□□□ -2.14
BRCA2P51587 AC008121.3-201ENST00000618726 433 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 AC092159.4-201ENST00000624944 550 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
BRCA2P51587 USP9YP27-201ENST00000418455 438 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 HMGN2P19-201ENST00000425149 265 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 NEK4P1-201ENST00000433383 879 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 AC079203.1-201ENST00000487972 404 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.68□□□□□ -2.14
BRCA2P51587 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
BRCA2P51587 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.68□□□□□ -2.14
BRCA2P51587 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
BRCA2P51587 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.68□□□□□ -2.14
BRCA2P51587 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.68□□□□□ -2.14
BRCA2P51587 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.68□□□□□ -2.14
BRCA2P51587 AP002345.1-201ENST00000456493 928 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.68□□□□□ -2.14
BRCA2P51587 AC090453.1-201ENST00000495560 436 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.68□□□□□ -2.14
BRCA2P51587 AC096720.1-201ENST00000604441 183 ntBASIC1.68□□□□□ -2.14
BRCA2P51587 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.68□□□□□ -2.14
BRCA2P51587 AC110774.1-201ENST00000623567 2018 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
BRCA2P51587 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
BRCA2P51587 MIR1183-201ENST00000408856 89 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms