Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC125238.1-201ENST00000448842 249 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.21□□□□□ -1.9
BRCC3P46736 TRGVB-201ENST00000453257 471 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 RPS20P24-201ENST00000457473 361 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.21□□□□□ -1.9
BRCC3P46736 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRCC3P46736 AC098862.1-201ENST00000504991 413 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 AC034244.1-201ENST00000507687 207 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 AC090136.1-201ENST00000520009 240 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRCC3P46736 AC008127.2-201ENST00000549925 1075 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.21□□□□□ -1.9
BRCC3P46736 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.21□□□□□ -1.9
BRCC3P46736 AC069304.2-201ENST00000605154 435 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 AL158042.1-201ENST00000605338 460 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 MIR7106-201ENST00000612419 65 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.21□□□□□ -1.9
BRCC3P46736 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
BRCC3P46736 AC244517.1-201ENST00000606030 2086 ntBASIC3.21□□□□□ -1.9
BRCC3P46736 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
BRCC3P46736 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 RNU6-263P-201ENST00000363811 107 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 SNORD82-201ENST00000365530 70 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.2□□□□□ -1.9
BRCC3P46736 RNA5SP107-201ENST00000411358 122 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC006960.1-201ENST00000419980 153 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC092447.3-201ENST00000426027 686 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 MTATP6P17-201ENST00000431030 672 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AL590103.1-201ENST00000434488 307 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 MTND3P1-201ENST00000441336 220 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AL662791.1-201ENST00000441992 928 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCC3P46736 MTCO2P25-201ENST00000447065 681 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 VN1R10P-201ENST00000447106 875 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC092757.1-201ENST00000467293 467 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 HMGB1P25-201ENST00000468402 607 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 AC118282.1-201ENST00000506408 765 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.2□□□□□ -1.9
BRCC3P46736 DUXAP5-201ENST00000529668 529 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC109635.4-202ENST00000531666 412 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.2□□□□□ -1.9
BRCC3P46736 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 AC023050.2-201ENST00000544968 387 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 ZNF321P-202ENST00000550843 495 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.2□□□□□ -1.9
BRCC3P46736 DUXAP1-201ENST00000556632 463 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 MTCO3P24-201ENST00000572729 782 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.2□□□□□ -1.9
BRCC3P46736 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC090425.2-201ENST00000608818 501 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC006023.2-201ENST00000609916 167 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AL590282.1-201ENST00000610379 1136 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC097478.2-201ENST00000610572 514 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC006329.2-201ENST00000611491 394 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AP002782.1-201ENST00000623107 614 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCC3P46736 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
BRCC3P46736 AC118273.1-201ENST00000525324 3006 ntBASIC3.2□□□□□ -1.9
BRCC3P46736 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCC3P46736 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BRCC3P46736 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCC3P46736 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCC3P46736 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCC3P46736 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.19□□□□□ -1.9
BRCC3P46736 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCC3P46736 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCC3P46736 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
BRCC3P46736 FAM133CP-201ENST00000332869 704 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
BRCC3P46736 RNU6-621P-201ENST00000364752 109 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 SNRPEP2-201ENST00000397592 279 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 RPL7P8-201ENST00000411964 730 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.19□□□□□ -1.9
BRCC3P46736 AL139421.1-201ENST00000423010 169 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.19□□□□□ -1.9
BRCC3P46736 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.19□□□□□ -1.9
BRCC3P46736 EZH2P1-201ENST00000431167 291 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 SETP5-201ENST00000437270 562 ntBASIC3.19□□□□□ -1.9
BRCC3P46736 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
BRCC3P46736 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms