Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR422A-201ENST00000362286 90 ntBASIC3.04□□□□□ -1.92
SSR1P43307 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
SSR1P43307 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
SSR1P43307 MIR144-201ENST00000384886 86 ntBASIC3.04□□□□□ -1.92
SSR1P43307 MIR493-201ENST00000385254 89 ntBASIC3.04□□□□□ -1.92
SSR1P43307 RPL7P8-201ENST00000411964 730 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.04□□□□□ -1.92
SSR1P43307 AL451074.5-201ENST00000415894 435 ntBASIC3.04□□□□□ -1.92
SSR1P43307 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.04□□□□□ -1.92
SSR1P43307 TMEM167AP1-201ENST00000423409 219 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.04□□□□□ -1.92
SSR1P43307 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.04□□□□□ -1.92
SSR1P43307 RPS20P5-201ENST00000434808 360 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.04□□□□□ -1.92
SSR1P43307 VN1R10P-201ENST00000447106 875 ntBASIC3.04□□□□□ -1.92
SSR1P43307 RPL37P4-201ENST00000448908 268 ntBASIC3.04□□□□□ -1.92
SSR1P43307 SNRPGP6-201ENST00000451124 220 ntBASIC3.04□□□□□ -1.92
SSR1P43307 HMGB3P3-201ENST00000510526 400 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.04□□□□□ -1.92
SSR1P43307 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.04□□□□□ -1.92
SSR1P43307 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.04□□□□□ -1.92
SSR1P43307 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.04□□□□□ -1.92
SSR1P43307 AP000867.2-201ENST00000532468 320 ntBASIC3.04□□□□□ -1.92
SSR1P43307 MED28P6-201ENST00000558776 231 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.04□□□□□ -1.92
SSR1P43307 AC034105.3-201ENST00000565294 442 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC138915.2-201ENST00000569776 97 ntBASIC3.04□□□□□ -1.92
SSR1P43307 MIR4666A-201ENST00000580160 79 ntBASIC3.04□□□□□ -1.92
SSR1P43307 MIR3944-201ENST00000581277 108 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC024153.1-201ENST00000603103 365 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC055876.5-201ENST00000605667 259 ntBASIC3.04□□□□□ -1.92
SSR1P43307 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.04□□□□□ -1.92
SSR1P43307 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AC004777.1-201ENST00000624317 287 ntBASIC3.04□□□□□ -1.92
SSR1P43307 AL512506.2-201ENST00000624472 458 ntBASIC3.04□□□□□ -1.92
SSR1P43307 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.04□□□□□ -1.92
SSR1P43307 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSR1P43307 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSR1P43307 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSR1P43307 AL139276.1-201ENST00000311910 1001 ntBASIC3.03□□□□□ -1.92
SSR1P43307 RNU6-707P-201ENST00000364647 95 ntBASIC3.03□□□□□ -1.92
SSR1P43307 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SSR1P43307 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
SSR1P43307 SNRPEP2-201ENST00000397592 279 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AL024507.1-201ENST00000412741 274 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AL356320.2-201ENST00000417263 507 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AC241584.1-201ENST00000438469 1241 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.03□□□□□ -1.92
SSR1P43307 RPL9P33-201ENST00000484311 566 ntBASIC3.03□□□□□ -1.92
SSR1P43307 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.03□□□□□ -1.92
SSR1P43307 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.03□□□□□ -1.92
SSR1P43307 RNA5SP82-201ENST00000516707 92 ntBASIC3.03□□□□□ -1.92
SSR1P43307 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.03□□□□□ -1.92
SSR1P43307 PSMA2P1-201ENST00000526365 646 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AC107016.2-201ENST00000547968 190 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.03□□□□□ -1.92
SSR1P43307 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.03□□□□□ -1.92
SSR1P43307 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.03□□□□□ -1.92
SSR1P43307 HSPE1P7-201ENST00000604681 321 ntBASIC3.03□□□□□ -1.92
SSR1P43307 BNIP3P19-201ENST00000605397 577 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AC011890.2-201ENST00000613393 294 ntBASIC3.03□□□□□ -1.92
SSR1P43307 CYP3A51P-201ENST00000633513 256 ntBASIC3.03□□□□□ -1.92
SSR1P43307 AC006927.2-201ENST00000639256 389 ntBASIC3.03□□□□□ -1.92
SSR1P43307 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SSR1P43307 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSR1P43307 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSR1P43307 RNU6-1066P-201ENST00000363573 105 ntBASIC3.02□□□□□ -1.93
SSR1P43307 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.02□□□□□ -1.93
SSR1P43307 AL035405.1-201ENST00000400795 710 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AL138885.1-201ENST00000405921 675 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AC069282.1-201ENST00000411911 526 ntBASIC3.02□□□□□ -1.93
SSR1P43307 MTCO1P39-201ENST00000426148 480 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AL512649.1-201ENST00000428997 581 ntBASIC3.02□□□□□ -1.93
SSR1P43307 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSR1P43307 AC092393.1-201ENST00000439625 742 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AC005297.2-201ENST00000450430 606 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.02□□□□□ -1.93
SSR1P43307 AC023424.2-201ENST00000493479 777 ntBASIC3.02□□□□□ -1.93
SSR1P43307 OR5BM1P-201ENST00000512021 366 ntBASIC3.02□□□□□ -1.93
SSR1P43307 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.02□□□□□ -1.93
SSR1P43307 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.02□□□□□ -1.93
SSR1P43307 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.02□□□□□ -1.93
SSR1P43307 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.02□□□□□ -1.93
SSR1P43307 OR7K1P-201ENST00000546439 926 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.02□□□□□ -1.93
SSR1P43307 H3F3AP1-201ENST00000559984 334 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.02□□□□□ -1.93
SSR1P43307 OR4K8P-201ENST00000578842 1048 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.02□□□□□ -1.93
SSR1P43307 MTATP6P2-201ENST00000603319 678 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AL022099.1-201ENST00000604551 712 ntBASIC3.02□□□□□ -1.93
SSR1P43307 AC084824.5-201ENST00000612009 413 ntBASIC3.02□□□□□ -1.93
SSR1P43307 MIR6895-201ENST00000613497 78 ntBASIC3.02□□□□□ -1.93
SSR1P43307 ATP5A1P2-202ENST00000616464 443 ntBASIC3.02□□□□□ -1.93
SSR1P43307 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSR1P43307 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSR1P43307 RNU6-1300P-201ENST00000391046 108 ntBASIC3.01□□□□□ -1.93
SSR1P43307 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSR1P43307 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.01□□□□□ -1.93
SSR1P43307 LUZP4P1-201ENST00000415420 344 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms