Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC093227.2-201ENST00000589357 285 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 AL031985.2-201ENST00000600955 480 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 AC004987.4-201ENST00000603383 338 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 OR2AS2P-201ENST00000606902 342 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 AL451064.1-201ENST00000607718 471 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.47□□□□□ -1.85
HNF4AP41235 AC122133.1-201ENST00000613964 233 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 CR392039.5-201ENST00000623201 510 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
HNF4AP41235 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.47□□□□□ -1.85
HNF4AP41235 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HNF4AP41235 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.47□□□□□ -1.85
HNF4AP41235 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.47□□□□□ -1.85
HNF4AP41235 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HNF4AP41235 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HNF4AP41235 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HNF4AP41235 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.85
HNF4AP41235 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
HNF4AP41235 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.46□□□□□ -1.86
HNF4AP41235 AL079343.1-201ENST00000572358 1771 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HNF4AP41235 RNU6-931P-201ENST00000363850 107 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 RNU6-553P-201ENST00000364047 96 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 RPL21P17-201ENST00000397467 475 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HNF4AP41235 RPS3AP24-201ENST00000407896 734 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 RAB9AP3-201ENST00000412737 573 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 BX119904.4-201ENST00000424402 301 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 AL591503.2-201ENST00000442314 1005 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC118469.1-201ENST00000442943 488 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.46□□□□□ -1.86
HNF4AP41235 RPS3AP46-201ENST00000448352 682 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 RAB9AP1-201ENST00000449393 573 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AL049714.1-201ENST00000466686 347 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC104472.2-201ENST00000469035 601 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC068724.1-201ENST00000487100 792 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.46□□□□□ -1.86
HNF4AP41235 XKRY-201ENST00000510392 1100 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 MTND1P22-201ENST00000510572 951 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC104619.4-201ENST00000510773 249 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.46□□□□□ -1.86
HNF4AP41235 AC117532.1-201ENST00000514638 323 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 TRMT10BP1-201ENST00000519377 943 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.46□□□□□ -1.86
HNF4AP41235 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.46□□□□□ -1.86
HNF4AP41235 ISCA1P3-201ENST00000577104 373 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.46□□□□□ -1.86
HNF4AP41235 AL390208.1-201ENST00000605885 644 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 AC092354.2-201ENST00000607786 514 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.46□□□□□ -1.86
HNF4AP41235 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.46□□□□□ -1.86
HNF4AP41235 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HNF4AP41235 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.46□□□□□ -1.86
HNF4AP41235 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HNF4AP41235 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HNF4AP41235 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.86
HNF4AP41235 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HNF4AP41235 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.46□□□□□ -1.86
HNF4AP41235 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HNF4AP41235 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HNF4AP41235 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
HNF4AP41235 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HNF4AP41235 SNORA62.3-201ENST00000365110 153 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 Y_RNA.318-201ENST00000365131 97 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.45□□□□□ -1.86
HNF4AP41235 SNORD116-9-201ENST00000384000 95 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 SNORD116-3-201ENST00000384287 95 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 SNORD116-7-201ENST00000384404 95 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 SNORD116-5-201ENST00000384462 95 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.45□□□□□ -1.86
HNF4AP41235 BX842559.1-201ENST00000419615 532 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.45□□□□□ -1.86
HNF4AP41235 RPS15AP6-201ENST00000420703 385 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.45□□□□□ -1.86
HNF4AP41235 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 ISCA1P2-201ENST00000438679 421 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 RSL24D1P3-201ENST00000449255 495 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 RPL26P28-201ENST00000451325 435 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 AC006539.3-201ENST00000454258 129 ntBASIC3.45□□□□□ -1.86
HNF4AP41235 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HNF4AP41235 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.45□□□□□ -1.86
HNF4AP41235 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
HNF4AP41235 KCTD9P5-201ENST00000504141 1170 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms