Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.95□□□□□ -1.62
CCNFP41002 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.95□□□□□ -1.62
CCNFP41002 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCNFP41002 SNURFL-201ENST00000309296 343 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RPL23P2-201ENST00000320371 421 ntBASIC4.95□□□□□ -1.62
CCNFP41002 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCNFP41002 RNU6-1284P-201ENST00000363701 100 ntBASIC4.95□□□□□ -1.62
CCNFP41002 Y_RNA.339-201ENST00000365325 102 ntBASIC4.95□□□□□ -1.62
CCNFP41002 SNORD42.2-201ENST00000365570 69 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RNU6-701P-201ENST00000384059 107 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RNU6-738P-201ENST00000384531 106 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RNA5SP219-201ENST00000390940 113 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RNU6-837P-201ENST00000391056 108 ntBASIC4.95□□□□□ -1.62
CCNFP41002 CYB5AP4-201ENST00000396692 399 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RPL5P18-201ENST00000406671 891 ntBASIC4.95□□□□□ -1.62
CCNFP41002 U3.35-201ENST00000408405 208 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RNA5SP111-201ENST00000411386 101 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC092647.2-201ENST00000452998 253 ntBASIC4.95□□□□□ -1.62
CCNFP41002 SCARNA18-201ENST00000459004 134 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC116533.1-201ENST00000459748 321 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RN7SL610P-201ENST00000463845 291 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC005532.2-201ENST00000467154 373 ntBASIC4.95□□□□□ -1.62
CCNFP41002 RN7SL727P-201ENST00000482164 296 ntBASIC4.95□□□□□ -1.62
CCNFP41002 VN1R105P-201ENST00000486595 910 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.95□□□□□ -1.62
CCNFP41002 RNU4-60P-201ENST00000517239 135 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC008694.2-201ENST00000517591 306 ntBASIC4.95□□□□□ -1.62
CCNFP41002 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.95□□□□□ -1.62
CCNFP41002 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.95□□□□□ -1.62
CCNFP41002 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.95□□□□□ -1.62
CCNFP41002 AC006270.2-201ENST00000578523 652 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.95□□□□□ -1.62
CCNFP41002 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCNFP41002 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.6-201ENST00000603753 252 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.11-201ENST00000604059 253 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AC104662.1-201ENST00000604448 511 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.1-201ENST00000604752 252 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.5-201ENST00000605253 252 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.12-201ENST00000605291 253 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.8-201ENST00000605353 252 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL080274.1-201ENST00000605565 220 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AL670379.7-201ENST00000605823 252 ntBASIC4.95□□□□□ -1.62
CCNFP41002 AP001486.3-201ENST00000615334 372 ntBASIC4.95□□□□□ -1.62
CCNFP41002 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.95□□□□□ -1.62
CCNFP41002 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.95□□□□□ -1.62
CCNFP41002 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCNFP41002 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.95□□□□□ -1.62
CCNFP41002 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCNFP41002 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCNFP41002 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCNFP41002 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCNFP41002 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.94□□□□□ -1.62
CCNFP41002 RPL32P3-201ENST00000359025 275 ntBASIC4.94□□□□□ -1.62
CCNFP41002 SNORA74A-201ENST00000364089 198 ntBASIC4.94□□□□□ -1.62
CCNFP41002 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCNFP41002 RNU6-946P-201ENST00000383878 107 ntBASIC4.94□□□□□ -1.62
CCNFP41002 MIR548K-201ENST00000408406 116 ntBASIC4.94□□□□□ -1.62
CCNFP41002 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.94□□□□□ -1.62
CCNFP41002 AC245054.2-201ENST00000415639 319 ntBASIC4.94□□□□□ -1.62
CCNFP41002 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.94□□□□□ -1.62
CCNFP41002 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 AC099677.1-201ENST00000420575 175 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.94□□□□□ -1.62
CCNFP41002 AL139396.1-201ENST00000421137 167 ntBASIC4.94□□□□□ -1.62
CCNFP41002 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.94□□□□□ -1.62
CCNFP41002 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.94□□□□□ -1.62
CCNFP41002 AL162389.1-201ENST00000449233 177 ntBASIC4.94□□□□□ -1.62
CCNFP41002 MRPS31P2-201ENST00000451581 518 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC010631.1-201ENST00000474150 156 ntBASIC4.94□□□□□ -1.62
CCNFP41002 RPL7P43-201ENST00000478876 753 ntBASIC4.94□□□□□ -1.62
CCNFP41002 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.94□□□□□ -1.62
CCNFP41002 RN7SL244P-201ENST00000493405 297 ntBASIC4.94□□□□□ -1.62
CCNFP41002 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCNFP41002 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.94□□□□□ -1.62
CCNFP41002 TBCAP3-201ENST00000512475 312 ntBASIC4.94□□□□□ -1.62
CCNFP41002 RNU6-566P-201ENST00000516790 107 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC090136.1-201ENST00000520009 240 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.94□□□□□ -1.62
CCNFP41002 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.94□□□□□ -1.62
CCNFP41002 RN7SL176P-201ENST00000580352 264 ntBASIC4.94□□□□□ -1.62
CCNFP41002 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCNFP41002 AC006116.3-201ENST00000592968 361 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC016925.2-201ENST00000605108 242 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC124303.1-201ENST00000605703 360 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC110801.1-201ENST00000623590 212 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.94□□□□□ -1.62
CCNFP41002 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CCNFP41002 C4BPAP1-201ENST00000415474 1893 ntBASIC4.94□□□□□ -1.62
CCNFP41002 AC108751.5-201ENST00000492880 1336 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms