Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 COX6CP8-201ENST00000522620 226 ntBASIC4.08□□□□□ -1.76
CIITAP33076 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 AC068587.4-201ENST00000533893 186 ntBASIC4.08□□□□□ -1.76
CIITAP33076 AC016957.1-201ENST00000534895 309 ntBASIC4.08□□□□□ -1.76
CIITAP33076 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.08□□□□□ -1.76
CIITAP33076 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 AC009101.1-201ENST00000568135 242 ntBASIC4.08□□□□□ -1.76
CIITAP33076 MIR4429-201ENST00000580105 73 ntBASIC4.08□□□□□ -1.76
CIITAP33076 MTATP6P3-201ENST00000581686 676 ntBASIC4.08□□□□□ -1.76
CIITAP33076 PRELID3BP8-201ENST00000604148 295 ntBASIC4.08□□□□□ -1.76
CIITAP33076 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.08□□□□□ -1.76
CIITAP33076 AC092794.1-201ENST00000612734 582 ntBASIC4.08□□□□□ -1.76
CIITAP33076 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CIITAP33076 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.08□□□□□ -1.76
CIITAP33076 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CIITAP33076 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CIITAP33076 AC106871.1-201ENST00000568324 3102 ntBASIC4.07□□□□□ -1.76
CIITAP33076 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CIITAP33076 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.07□□□□□ -1.76
CIITAP33076 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CIITAP33076 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CIITAP33076 RNA5SP42-201ENST00000364278 115 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AL024474.1-201ENST00000404655 591 ntBASIC4.07□□□□□ -1.76
CIITAP33076 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.07□□□□□ -1.76
CIITAP33076 AL513174.1-201ENST00000423182 629 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.07□□□□□ -1.76
CIITAP33076 RPL21P112-201ENST00000434403 463 ntBASIC4.07□□□□□ -1.76
CIITAP33076 SKP1P1-201ENST00000438081 489 ntBASIC4.07□□□□□ -1.76
CIITAP33076 SNRPEP7-201ENST00000438350 220 ntBASIC4.07□□□□□ -1.76
CIITAP33076 PGBD4P3-201ENST00000440731 581 ntBASIC4.07□□□□□ -1.76
CIITAP33076 NANOGNBP1-201ENST00000448444 480 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.07□□□□□ -1.76
CIITAP33076 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.07□□□□□ -1.76
CIITAP33076 RBMY2UP-201ENST00000453474 324 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.07□□□□□ -1.76
CIITAP33076 BX322784.1-201ENST00000455793 1077 ntBASIC4.07□□□□□ -1.76
CIITAP33076 OR6K1P-201ENST00000456766 971 ntBASIC4.07□□□□□ -1.76
CIITAP33076 PABPC1P3-201ENST00000469174 459 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AC017015.1-201ENST00000477387 286 ntBASIC4.07□□□□□ -1.76
CIITAP33076 OR5H5P-201ENST00000503164 928 ntBASIC4.07□□□□□ -1.76
CIITAP33076 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.07□□□□□ -1.76
CIITAP33076 RN7SKP83-201ENST00000516512 178 ntBASIC4.07□□□□□ -1.76
CIITAP33076 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
CIITAP33076 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.07□□□□□ -1.76
CIITAP33076 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CIITAP33076 CCNG2P1-201ENST00000549521 1000 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.07□□□□□ -1.76
CIITAP33076 AC010928.3-201ENST00000587712 541 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AC010591.1-201ENST00000603941 649 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AC006077.1-201ENST00000604746 343 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AL445264.1-201ENST00000621719 171 ntBASIC4.07□□□□□ -1.76
CIITAP33076 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CIITAP33076 AL049781.1-201ENST00000623195 3585 ntBASIC4.07□□□□□ -1.76
CIITAP33076 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CIITAP33076 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CIITAP33076 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.06□□□□□ -1.76
CIITAP33076 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.06□□□□□ -1.76
CIITAP33076 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CIITAP33076 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.06□□□□□ -1.76
CIITAP33076 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CIITAP33076 AL157700.1-201ENST00000561973 1432 ntBASIC4.06□□□□□ -1.76
CIITAP33076 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.06□□□□□ -1.76
CIITAP33076 Y_RNA.6-201ENST00000362350 114 ntBASIC4.06□□□□□ -1.76
CIITAP33076 RNA5SP119-201ENST00000362715 117 ntBASIC4.06□□□□□ -1.76
CIITAP33076 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.06□□□□□ -1.76
CIITAP33076 SNORA7.2-201ENST00000364446 145 ntBASIC4.06□□□□□ -1.76
CIITAP33076 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CIITAP33076 RNU6-339P-201ENST00000384310 107 ntBASIC4.06□□□□□ -1.76
CIITAP33076 SNORA40.3-201ENST00000390964 122 ntBASIC4.06□□□□□ -1.76
CIITAP33076 MIR1305-201ENST00000408300 86 ntBASIC4.06□□□□□ -1.76
CIITAP33076 U3.39-201ENST00000408569 239 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC244098.2-201ENST00000422068 99 ntBASIC4.06□□□□□ -1.76
CIITAP33076 HSPD1P21-201ENST00000436541 245 ntBASIC4.06□□□□□ -1.76
CIITAP33076 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.06□□□□□ -1.76
CIITAP33076 PDSS1P2-201ENST00000449397 678 ntBASIC4.06□□□□□ -1.76
CIITAP33076 RPS20P32-201ENST00000456044 356 ntBASIC4.06□□□□□ -1.76
CIITAP33076 snoU13.3-201ENST00000459441 104 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.06□□□□□ -1.76
CIITAP33076 AC068305.1-201ENST00000497406 726 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC138853.1-201ENST00000503549 823 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC022447.3-201ENST00000506865 495 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC109464.2-201ENST00000510242 943 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC034159.1-201ENST00000513885 583 ntBASIC4.06□□□□□ -1.76
CIITAP33076 SNORA70.14-201ENST00000516205 110 ntBASIC4.06□□□□□ -1.76
CIITAP33076 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CIITAP33076 IGKV2D-19-201ENST00000523346 262 ntBASIC4.06□□□□□ -1.76
CIITAP33076 OR5AP1P-201ENST00000529730 940 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC012182.1-201ENST00000570133 895 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC006270.2-201ENST00000578523 652 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.06□□□□□ -1.76
CIITAP33076 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.06□□□□□ -1.76
CIITAP33076 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.06□□□□□ -1.76
CIITAP33076 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AC068944.2-201ENST00000610373 403 ntBASIC4.06□□□□□ -1.76
CIITAP33076 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.06□□□□□ -1.76
CIITAP33076 AC099654.13-201ENST00000639774 207 ntBASIC4.06□□□□□ -1.76
CIITAP33076 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CIITAP33076 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.06□□□□□ -1.76
CIITAP33076 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms