Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC083906.5-201ENST00000503722 328 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 VN1R104P-201ENST00000505115 1009 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
CD40LGP29965 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.38□□□□□ -2.03
CD40LGP29965 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.38□□□□□ -2.03
CD40LGP29965 AC009812.2-201ENST00000517657 457 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 COX6CP5-201ENST00000527162 228 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
CD40LGP29965 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.38□□□□□ -2.03
CD40LGP29965 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.38□□□□□ -2.03
CD40LGP29965 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.38□□□□□ -2.03
CD40LGP29965 AC015688.2-201ENST00000584523 262 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.38□□□□□ -2.03
CD40LGP29965 AC008277.2-201ENST00000605196 797 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.38□□□□□ -2.03
CD40LGP29965 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CD40LGP29965 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.38□□□□□ -2.03
CD40LGP29965 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.38□□□□□ -2.03
CD40LGP29965 PABPC1P9-201ENST00000426076 1612 ntBASIC2.38□□□□□ -2.03
CD40LGP29965 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.38□□□□□ -2.03
CD40LGP29965 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
CD40LGP29965 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CD40LGP29965 SGO1P1-201ENST00000603525 1447 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 RNU6-619P-201ENST00000365146 108 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 MIR16-1-201ENST00000385271 89 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AL158825.1-201ENST00000414735 521 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 RPLP0P7-201ENST00000416050 667 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC098614.2-201ENST00000426040 255 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC024082.2-201ENST00000434771 238 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.37□□□□□ -2.03
CD40LGP29965 AC104389.3-201ENST00000445629 235 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AL592447.1-201ENST00000447592 540 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.37□□□□□ -2.03
CD40LGP29965 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.37□□□□□ -2.03
CD40LGP29965 FAM172BP-201ENST00000487497 1089 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.37□□□□□ -2.03
CD40LGP29965 AC011352.3-201ENST00000505162 593 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC117522.3-201ENST00000507974 584 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 HMGB3P3-201ENST00000510526 400 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
CD40LGP29965 RNU5A-7P-201ENST00000515979 116 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 RNU6-928P-201ENST00000516876 104 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC087808.1-201ENST00000520501 361 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CD40LGP29965 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CD40LGP29965 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.37□□□□□ -2.03
CD40LGP29965 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CD40LGP29965 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
CD40LGP29965 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.37□□□□□ -2.03
CD40LGP29965 GTF2IP8-201ENST00000560687 584 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.37□□□□□ -2.03
CD40LGP29965 MIR4658-201ENST00000584344 65 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC105224.1-201ENST00000587055 421 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC005498.1-201ENST00000592125 465 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC012493.2-201ENST00000595083 291 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC006539.2-201ENST00000601729 572 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 YPEL5P2-201ENST00000605553 359 ntBASIC2.37□□□□□ -2.03
CD40LGP29965 AC007336.1-201ENST00000576365 3828 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CD40LGP29965 RNU6-1035P-201ENST00000384477 107 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 MIR491-201ENST00000384877 84 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 RNU6-796P-201ENST00000391086 107 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.36□□□□□ -2.03
CD40LGP29965 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.36□□□□□ -2.03
CD40LGP29965 AL121871.1-201ENST00000443413 436 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 COX6CP12-201ENST00000446748 202 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CD40LGP29965 RFC5P1-201ENST00000454419 874 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 MTND4LP3-201ENST00000468320 276 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 MRPL42P6-201ENST00000486397 371 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC090096.1-201ENST00000489168 390 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC006445.1-201ENST00000491925 405 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 EIF4EP3-201ENST00000498782 656 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.36□□□□□ -2.03
CD40LGP29965 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC091826.1-201ENST00000514065 313 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 SCGB1D5P-201ENST00000515134 247 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 SNORA31.18-201ENST00000517043 134 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 RN7SKP57-201ENST00000517248 293 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC109329.2-201ENST00000519658 482 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC087241.2-201ENST00000535801 324 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC022080.3-201ENST00000544433 482 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.36□□□□□ -2.03
CD40LGP29965 CKS1BP1-201ENST00000555221 240 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.36□□□□□ -2.03
CD40LGP29965 AC023824.3-201ENST00000569003 562 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 ADAM3B-201ENST00000569937 840 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.36□□□□□ -2.03
CD40LGP29965 MIR3616-201ENST00000584070 92 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC011471.1-201ENST00000585766 187 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 MIR8057-201ENST00000620957 69 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AC026422.1-201ENST00000623961 452 ntBASIC2.36□□□□□ -2.03
CD40LGP29965 AP003399.1-201ENST00000637534 361 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms