Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 KC877373.1-201ENST00000479066 408 ntBASIC2.53□□□□□ -2
USF1P22415 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.53□□□□□ -2
USF1P22415 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.53□□□□□ -2
USF1P22415 RNA5SP356-201ENST00000515972 94 ntBASIC2.53□□□□□ -2
USF1P22415 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.53□□□□□ -2
USF1P22415 AC104986.1-201ENST00000517978 436 ntBASIC2.53□□□□□ -2
USF1P22415 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.53□□□□□ -2
USF1P22415 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.53□□□□□ -2
USF1P22415 AC087276.1-201ENST00000529659 480 ntBASIC2.53□□□□□ -2
USF1P22415 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.53□□□□□ -2
USF1P22415 DNAJC8P1-201ENST00000554535 372 ntBASIC2.53□□□□□ -2
USF1P22415 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.53□□□□□ -2
USF1P22415 MIR4672-201ENST00000583126 81 ntBASIC2.53□□□□□ -2
USF1P22415 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.53□□□□□ -2
USF1P22415 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.53□□□□□ -2
USF1P22415 AC099785.1-201ENST00000605697 437 ntBASIC2.53□□□□□ -2
USF1P22415 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.53□□□□□ -2
USF1P22415 AL158211.2-201ENST00000607282 395 ntBASIC2.53□□□□□ -2
USF1P22415 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.53□□□□□ -2
USF1P22415 MKKS-204ENST00000639674 192 ntBASIC2.53□□□□□ -2
USF1P22415 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
USF1P22415 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USF1P22415 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USF1P22415 Y_RNA.25-201ENST00000362528 102 ntBASIC2.52□□□□□ -2.01
USF1P22415 CD24P4-201ENST00000382840 243 ntBASIC2.52□□□□□ -2.01
USF1P22415 RNU6-851P-201ENST00000384565 107 ntBASIC2.52□□□□□ -2.01
USF1P22415 AL603865.2-201ENST00000401679 213 ntBASIC2.52□□□□□ -2.01
USF1P22415 RNA5SP274-201ENST00000410484 108 ntBASIC2.52□□□□□ -2.01
USF1P22415 VN1R51P-201ENST00000411675 945 ntBASIC2.52□□□□□ -2.01
USF1P22415 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.52□□□□□ -2.01
USF1P22415 RPL7P10-201ENST00000417407 739 ntBASIC2.52□□□□□ -2.01
USF1P22415 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.52□□□□□ -2.01
USF1P22415 BEND7P1-201ENST00000422058 457 ntBASIC2.52□□□□□ -2.01
USF1P22415 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 MTCO1P3-201ENST00000429327 192 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.52□□□□□ -2.01
USF1P22415 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.52□□□□□ -2.01
USF1P22415 RAC1P7-201ENST00000445367 377 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.52□□□□□ -2.01
USF1P22415 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.52□□□□□ -2.01
USF1P22415 NAMPTP2-201ENST00000505629 1115 ntBASIC2.52□□□□□ -2.01
USF1P22415 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.52□□□□□ -2.01
USF1P22415 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.52□□□□□ -2.01
USF1P22415 AC118465.1-201ENST00000513820 1271 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC091826.1-201ENST00000514065 313 ntBASIC2.52□□□□□ -2.01
USF1P22415 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 AC103783.1-201ENST00000520506 373 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC125611.1-201ENST00000549563 229 ntBASIC2.52□□□□□ -2.01
USF1P22415 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.52□□□□□ -2.01
USF1P22415 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USF1P22415 AC023825.1-201ENST00000566704 1030 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC138915.2-201ENST00000569776 97 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC097504.2-201ENST00000608088 454 ntBASIC2.52□□□□□ -2.01
USF1P22415 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.52□□□□□ -2.01
USF1P22415 AC010975.3-201ENST00000618727 978 ntBASIC2.52□□□□□ -2.01
USF1P22415 AP003485.2-201ENST00000623636 610 ntBASIC2.52□□□□□ -2.01
USF1P22415 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USF1P22415 AC092447.7-201ENST00000422212 1621 ntBASIC2.52□□□□□ -2.01
USF1P22415 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USF1P22415 AC233263.6-201ENST00000631132 1963 ntBASIC2.52□□□□□ -2.01
USF1P22415 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
USF1P22415 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.52□□□□□ -2.01
USF1P22415 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.51□□□□□ -2.01
USF1P22415 GABRG2-229ENST00000641017 3628 ntBASIC2.51□□□□□ -2.01
USF1P22415 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.51□□□□□ -2.01
USF1P22415 RNU6-799P-201ENST00000363567 107 ntBASIC2.51□□□□□ -2.01
USF1P22415 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USF1P22415 AL079342.2-201ENST00000403367 482 ntBASIC2.51□□□□□ -2.01
USF1P22415 RPL19P1-201ENST00000411635 428 ntBASIC2.51□□□□□ -2.01
USF1P22415 RAP1BP1-201ENST00000412709 553 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC019178.2-201ENST00000423595 505 ntBASIC2.51□□□□□ -2.01
USF1P22415 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 SAR1AP4-201ENST00000429225 591 ntBASIC2.51□□□□□ -2.01
USF1P22415 AL139132.1-201ENST00000431587 344 ntBASIC2.51□□□□□ -2.01
USF1P22415 MTND2P5-201ENST00000432656 1006 ntBASIC2.51□□□□□ -2.01
USF1P22415 RPS20P5-201ENST00000434808 360 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC093156.1-201ENST00000440382 670 ntBASIC2.51□□□□□ -2.01
USF1P22415 MTCYBP42-201ENST00000444653 1130 ntBASIC2.51□□□□□ -2.01
USF1P22415 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
USF1P22415 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 PNPLA4P1-201ENST00000458328 305 ntBASIC2.51□□□□□ -2.01
USF1P22415 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 OR4G11P-201ENST00000492842 939 ntBASIC2.51□□□□□ -2.01
USF1P22415 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 AC098799.2-201ENST00000509466 868 ntBASIC2.51□□□□□ -2.01
USF1P22415 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.51□□□□□ -2.01
USF1P22415 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 AP003066.2-201ENST00000529375 555 ntBASIC2.51□□□□□ -2.01
USF1P22415 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.51□□□□□ -2.01
USF1P22415 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.51□□□□□ -2.01
USF1P22415 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.51□□□□□ -2.01
USF1P22415 AC087897.1-201ENST00000550134 156 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms