Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 BX510359.4-201ENST00000423750 193 ntBASIC2.82□□□□□ -1.96
CFTRP13569 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.82□□□□□ -1.96
CFTRP13569 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.82□□□□□ -1.96
CFTRP13569 AP000873.1-201ENST00000463987 400 ntBASIC2.82□□□□□ -1.96
CFTRP13569 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.82□□□□□ -1.96
CFTRP13569 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.82□□□□□ -1.96
CFTRP13569 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.82□□□□□ -1.96
CFTRP13569 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.82□□□□□ -1.96
CFTRP13569 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.82□□□□□ -1.96
CFTRP13569 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.81□□□□□ -1.96
CFTRP13569 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CFTRP13569 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CFTRP13569 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.81□□□□□ -1.96
CFTRP13569 RNU6-174P-201ENST00000410406 106 ntBASIC2.81□□□□□ -1.96
CFTRP13569 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.81□□□□□ -1.96
CFTRP13569 PAICSP7-201ENST00000419829 962 ntBASIC2.81□□□□□ -1.96
CFTRP13569 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CFTRP13569 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.81□□□□□ -1.96
CFTRP13569 RPL21P2-201ENST00000440049 481 ntBASIC2.81□□□□□ -1.96
CFTRP13569 OR7L1P-201ENST00000456181 380 ntBASIC2.81□□□□□ -1.96
CFTRP13569 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.81□□□□□ -1.96
CFTRP13569 RPL5P13-201ENST00000462840 709 ntBASIC2.81□□□□□ -1.96
CFTRP13569 AC021146.7-201ENST00000509604 775 ntBASIC2.81□□□□□ -1.96
CFTRP13569 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.81□□□□□ -1.96
CFTRP13569 MTND5P4-201ENST00000514978 288 ntBASIC2.81□□□□□ -1.96
CFTRP13569 RNU6-347P-201ENST00000516658 105 ntBASIC2.81□□□□□ -1.96
CFTRP13569 PRELID2P1-201ENST00000552837 301 ntBASIC2.81□□□□□ -1.96
CFTRP13569 MYL12BP1-201ENST00000569826 507 ntBASIC2.81□□□□□ -1.96
CFTRP13569 AC105429.2-201ENST00000610567 517 ntBASIC2.81□□□□□ -1.96
CFTRP13569 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.81□□□□□ -1.96
CFTRP13569 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
CFTRP13569 MTND4P23-201ENST00000447723 1363 ntBASIC2.81□□□□□ -1.96
CFTRP13569 AC011978.2-201ENST00000569835 2054 ntBASIC2.8□□□□□ -1.96
CFTRP13569 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CFTRP13569 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CFTRP13569 RNA5SP167-201ENST00000365461 116 ntBASIC2.8□□□□□ -1.96
CFTRP13569 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.8□□□□□ -1.96
CFTRP13569 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CFTRP13569 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.8□□□□□ -1.96
CFTRP13569 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.8□□□□□ -1.96
CFTRP13569 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.8□□□□□ -1.96
CFTRP13569 MIR4419B-201ENST00000577260 68 ntBASIC2.8□□□□□ -1.96
CFTRP13569 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CFTRP13569 RNU1-42P-201ENST00000364033 160 ntBASIC2.79□□□□□ -1.96
CFTRP13569 DPPA2P1-201ENST00000428060 556 ntBASIC2.79□□□□□ -1.96
CFTRP13569 RAB9AP5-201ENST00000437794 597 ntBASIC2.79□□□□□ -1.96
CFTRP13569 RAB9AP2-201ENST00000443911 597 ntBASIC2.79□□□□□ -1.96
CFTRP13569 AC009474.2-201ENST00000451383 136 ntBASIC2.79□□□□□ -1.96
CFTRP13569 AC092451.1-201ENST00000480211 153 ntBASIC2.79□□□□□ -1.96
CFTRP13569 Y_RNA.670-201ENST00000516255 105 ntBASIC2.79□□□□□ -1.96
CFTRP13569 AP002748.2-201ENST00000528671 348 ntBASIC2.79□□□□□ -1.96
CFTRP13569 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.79□□□□□ -1.96
CFTRP13569 AL161670.1-201ENST00000554348 137 ntBASIC2.79□□□□□ -1.96
CFTRP13569 AL161713.1-201ENST00000555538 145 ntBASIC2.79□□□□□ -1.96
CFTRP13569 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.79□□□□□ -1.96
CFTRP13569 AC138649.5-201ENST00000637456 137 ntBASIC2.79□□□□□ -1.96
CFTRP13569 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CFTRP13569 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CFTRP13569 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CFTRP13569 Y_RNA.191-201ENST00000363972 113 ntBASIC2.78□□□□□ -1.96
CFTRP13569 MTND4LP21-201ENST00000415303 295 ntBASIC2.78□□□□□ -1.96
CFTRP13569 SETP8-201ENST00000435341 628 ntBASIC2.78□□□□□ -1.96
CFTRP13569 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.78□□□□□ -1.96
CFTRP13569 SNRPGP3-201ENST00000469405 227 ntBASIC2.78□□□□□ -1.96
CFTRP13569 RPS15AP36-201ENST00000492022 382 ntBASIC2.78□□□□□ -1.96
CFTRP13569 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.78□□□□□ -1.96
CFTRP13569 OR8X1P-201ENST00000534542 869 ntBASIC2.78□□□□□ -1.96
CFTRP13569 AC034268.2-201ENST00000571784 482 ntBASIC2.78□□□□□ -1.96
CFTRP13569 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.78□□□□□ -1.96
CFTRP13569 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.78□□□□□ -1.96
CFTRP13569 AC034102.8-201ENST00000615146 484 ntBASIC2.78□□□□□ -1.96
CFTRP13569 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CFTRP13569 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CFTRP13569 AC110774.1-201ENST00000623567 2018 ntBASIC2.78□□□□□ -1.96
CFTRP13569 SNORD48-201ENST00000364953 64 ntBASIC2.77□□□□□ -1.97
CFTRP13569 MCTS2P-201ENST00000394552 546 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AC009238.1-201ENST00000442165 424 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AC009237.6-201ENST00000446969 424 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AL121594.1-201ENST00000475906 575 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AC087190.1-201ENST00000484462 480 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.77□□□□□ -1.97
CFTRP13569 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.77□□□□□ -1.97
CFTRP13569 RNU1-40P-201ENST00000516816 164 ntBASIC2.77□□□□□ -1.97
CFTRP13569 RNU1-97P-201ENST00000516872 164 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AC005951.1-201ENST00000576706 485 ntBASIC2.77□□□□□ -1.97
CFTRP13569 AL359740.1-201ENST00000624340 592 ntBASIC2.77□□□□□ -1.97
CFTRP13569 CUL4AP1-201ENST00000514750 1863 ntBASIC2.77□□□□□ -1.97
CFTRP13569 SNORA7.1-201ENST00000363750 139 ntBASIC2.77□□□□□ -1.97
CFTRP13569 HMGB1P10-201ENST00000395823 563 ntBASIC2.77□□□□□ -1.97
CFTRP13569 RN7SKP101-201ENST00000411376 320 ntBASIC2.77□□□□□ -1.97
CFTRP13569 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.77□□□□□ -1.97
CFTRP13569 UBE2V2P1-201ENST00000434717 398 ntBASIC2.77□□□□□ -1.97
CFTRP13569 HMGB3P30-201ENST00000457863 606 ntBASIC2.77□□□□□ -1.97
CFTRP13569 SNORD108-201ENST00000459332 71 ntBASIC2.77□□□□□ -1.97
CFTRP13569 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
CFTRP13569 RPL23AP55-201ENST00000498163 452 ntBASIC2.77□□□□□ -1.97
CFTRP13569 KATNBL1P1-201ENST00000605192 748 ntBASIC2.77□□□□□ -1.97
CFTRP13569 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.77□□□□□ -1.97
CFTRP13569 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.77□□□□□ -1.97
CFTRP13569 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms