Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 MIR5186-201ENST00000577504 120 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 MIR3944-201ENST00000581277 108 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC009093.8-201ENST00000641769 292 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC138915.3-201ENST00000562908 1389 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 RPS4XP5-202ENST00000449995 1334 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 RNU6-1085P-201ENST00000363576 107 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 RNU6-877P-201ENST00000383868 107 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AL031679.1-201ENST00000400616 525 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 RPL7P25-201ENST00000404151 721 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 RPL31P52-201ENST00000407532 367 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC069218.2-201ENST00000411665 344 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC091286.1-201ENST00000431233 461 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC132479.1-201ENST00000449160 144 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 RNU6-420P-201ENST00000458780 107 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 MTCO2P30-201ENST00000503662 364 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 COX6CP8-201ENST00000522620 226 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC007991.1-201ENST00000522680 631 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC123904.2-201ENST00000548059 300 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AL845331.3-202ENST00000562856 261 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC018552.3-201ENST00000567416 561 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 BBIP1P1-201ENST00000602999 279 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 MIR98-201ENST00000606724 119 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AL391261.4-201ENST00000616012 481 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 AC068722.2-201ENST00000618734 544 ntBASIC4.5□□□□□ -1.69
HLA-DOAP06340 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOAP06340 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOAP06340 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 NUP58P1-201ENST00000502546 1738 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 RPL23AP57-201ENST00000332361 466 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 Y_RNA.573-201ENST00000384763 105 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 RNA5SP44-201ENST00000410446 133 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC078974.1-201ENST00000411597 223 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 RPS26P47-201ENST00000427219 348 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC006946.1-201ENST00000429106 328 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 ARPC3P5-201ENST00000448802 534 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC104073.1-201ENST00000451988 151 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 MTND1P12-201ENST00000455231 147 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC022861.1-201ENST00000522981 663 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 IGKV2D-19-201ENST00000523346 262 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 HIF1AP1-201ENST00000553642 175 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 MIR3682-201ENST00000581338 84 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AP001429.1-201ENST00000602568 530 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC245014.2-201ENST00000603689 287 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC007363.1-201ENST00000604736 620 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC246785.4-201ENST00000605374 287 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC244100.1-202ENST00000621554 382 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC112487.2-201ENST00000637950 304 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms