Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 OR10V3P-201ENST00000525712 725 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AP001189.2-201ENST00000527320 189 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 NDUFS5P6-201ENST00000529136 295 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MT-ND4P03905 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 MIR5708-201ENST00000579723 85 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 BNIP3P11-201ENST00000603878 563 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AP002802.2-201ENST00000605877 235 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AC106028.5-201ENST00000610332 395 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 MIR6798-201ENST00000612887 67 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 CR381653.2-201ENST00000624041 768 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 MKKS-204ENST00000639674 192 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.41□□□□□ -2.02
MT-ND4P03905 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
MT-ND4P03905 AC026241.1-201ENST00000517873 2142 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AC092593.1-201ENST00000515413 1815 ntBASIC2.4□□□□□ -2.02
MT-ND4P03905 Z99496.1-201ENST00000469424 1477 ntBASIC2.4□□□□□ -2.02
MT-ND4P03905 MTND5P1-201ENST00000445440 1375 ntBASIC2.4□□□□□ -2.02
MT-ND4P03905 NACA3P-201ENST00000359690 648 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 RNU6-1155P-201ENST00000363554 107 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 RNU6-878P-201ENST00000384578 110 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 SNORA48.7-201ENST00000391302 135 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 RNU2-47P-201ENST00000410649 186 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AC069282.1-201ENST00000411911 526 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 MTCO1P3-201ENST00000429327 192 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 MTCYBP42-201ENST00000444653 1130 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
MT-ND4P03905 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.4□□□□□ -2.03
MT-ND4P03905 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 SETP11-201ENST00000473027 690 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 KC877373.1-201ENST00000479066 408 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MT-ND4P03905 AC010625.1-201ENST00000511296 403 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 RNU6-1261P-201ENST00000517194 104 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 OR5AK1P-201ENST00000524837 922 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AP002404.1-201ENST00000532005 451 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 HPRT1P3-201ENST00000539521 576 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.4□□□□□ -2.03
MT-ND4P03905 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 AC068620.3-201ENST00000602749 560 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 RPL23AP92-201ENST00000603609 255 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AL022099.1-201ENST00000604551 712 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AL161734.1-201ENST00000609720 557 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 CYCSP41-201ENST00000616920 296 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 AC244100.1-202ENST00000621554 382 ntBASIC2.4□□□□□ -2.03
MT-ND4P03905 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.4□□□□□ -2.03
MT-ND4P03905 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.4□□□□□ -2.03
MT-ND4P03905 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MT-ND4P03905 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 RNU6-851P-201ENST00000384565 107 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MT-ND4P03905 SNRPEP2-201ENST00000397592 279 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AL136372.1-201ENST00000403060 228 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AL139095.1-201ENST00000404326 391 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.39□□□□□ -2.03
MT-ND4P03905 USP9YP21-201ENST00000420603 432 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 RPL7P37-201ENST00000425095 738 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC093156.1-201ENST00000440382 670 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AL358232.1-201ENST00000448030 501 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AL589880.1-201ENST00000448271 287 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC027673.1-201ENST00000456245 405 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 BX510359.1-201ENST00000456973 237 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC016550.1-201ENST00000505348 785 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC002456.2-201ENST00000509356 380 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC108043.1-201ENST00000512696 574 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 MTND5P4-201ENST00000514978 288 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 SCGB1D5P-201ENST00000515134 247 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC090136.1-201ENST00000520009 240 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 MTND1P36-201ENST00000522384 936 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AP001804.3-201ENST00000525146 880 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC125611.1-201ENST00000549563 229 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 H3F3AP1-201ENST00000559984 334 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 AC126365.2-201ENST00000580630 379 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 BNIP3P24-201ENST00000593398 557 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC008739.2-201ENST00000597006 317 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC006539.2-201ENST00000601729 572 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AL137843.1-201ENST00000605078 385 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms