Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.43□□□□□ -1.86
COL2A1P02458 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.43□□□□□ -1.86
COL2A1P02458 MTAPP1-201ENST00000489154 819 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 AC116353.2-201ENST00000505332 712 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.43□□□□□ -1.86
COL2A1P02458 AC093281.2-201ENST00000510153 597 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 AC008837.2-201ENST00000513076 418 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
COL2A1P02458 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.43□□□□□ -1.86
COL2A1P02458 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.43□□□□□ -1.86
COL2A1P02458 CYCSP39-201ENST00000565821 309 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 MIR548S-201ENST00000581352 82 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 AC072046.2-201ENST00000618366 268 ntBASIC3.43□□□□□ -1.86
COL2A1P02458 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COL2A1P02458 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
COL2A1P02458 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL2A1P02458 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
COL2A1P02458 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL2A1P02458 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL2A1P02458 snoZ40.1-201ENST00000364540 72 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 Y_RNA.303-201ENST00000364998 94 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL2A1P02458 MIR9-1-201ENST00000385198 89 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 HMGB1P10-201ENST00000395823 563 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 RNA5SP274-201ENST00000410484 108 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC245291.1-201ENST00000419501 328 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 RPS12P23-201ENST00000419579 400 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 YWHAZP7-201ENST00000436906 631 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AL603825.1-201ENST00000438481 80 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 RBMX2P4-201ENST00000441256 376 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 RPL23AP76-201ENST00000441860 458 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AL606662.1-201ENST00000445763 553 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 RPS20P22-201ENST00000473700 357 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.42□□□□□ -1.86
COL2A1P02458 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.42□□□□□ -1.86
COL2A1P02458 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.42□□□□□ -1.86
COL2A1P02458 AC104090.1-201ENST00000506341 1171 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 CBX3P3-201ENST00000508108 532 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.42□□□□□ -1.86
COL2A1P02458 FABP5P5-201ENST00000515537 406 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 snoZ278.1-201ENST00000517059 112 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC025881.1-201ENST00000518851 512 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.42□□□□□ -1.86
COL2A1P02458 AP000873.5-201ENST00000533906 236 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.42□□□□□ -1.86
COL2A1P02458 AC087465.1-201ENST00000560574 245 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 ATP5F1P7-201ENST00000567330 760 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC087683.1-201ENST00000591187 441 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC073569.3-201ENST00000619055 682 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC009509.4-201ENST00000619202 509 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AL356596.1-201ENST00000624230 379 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 AC000367.1-201ENST00000452711 1766 ntBASIC3.42□□□□□ -1.86
COL2A1P02458 MTND4P29-201ENST00000503122 1372 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 RNU6-1119P-201ENST00000384349 108 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 RNU6-31P-201ENST00000384388 108 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 RNU2-16P-201ENST00000410712 136 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 TPMTP3-201ENST00000411928 735 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 RPL21P40-201ENST00000428586 483 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC087499.2-201ENST00000432861 149 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC105402.2-201ENST00000438503 358 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 EEF1B2P7-201ENST00000451177 676 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 TPT1P7-201ENST00000458300 517 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC107015.1-201ENST00000466902 747 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 SETP11-201ENST00000473027 690 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL2A1P02458 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC005178.1-201ENST00000508392 440 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC114781.4-201ENST00000513707 639 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 Y_RNA.676-201ENST00000516393 96 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.41□□□□□ -1.86
COL2A1P02458 AP002963.1-201ENST00000530590 184 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AC079600.2-201ENST00000550076 130 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 RPS3AP4-201ENST00000555161 764 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 EIF1P4-201ENST00000572664 335 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 MTCO1P40-201ENST00000574371 625 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AL451074.6-201ENST00000608512 729 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC007684.1-201ENST00000609671 477 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC004223.4-201ENST00000612426 332 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AL590808.1-201ENST00000618696 141 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL008636.1-201ENST00000625038 1018 ntBASIC3.41□□□□□ -1.86
COL2A1P02458 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.41□□□□□ -1.86
COL2A1P02458 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL2A1P02458 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.41□□□□□ -1.86
COL2A1P02458 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL2A1P02458 ASNSP1-201ENST00000518311 1939 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms