Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFP01375 FNDC3CP-201ENST00000420795 1155 ntBASIC1.96□□□□□ -2.1
TNFP01375 AC003685.2-201ENST00000422795 395 ntBASIC1.96□□□□□ -2.1
TNFP01375 UBE2D3P2-201ENST00000424409 445 ntBASIC1.96□□□□□ -2.1
TNFP01375 AC244033.1-201ENST00000426826 870 ntBASIC1.96□□□□□ -2.1
TNFP01375 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFP01375 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFP01375 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFP01375 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFP01375 FABP5P13-201ENST00000452144 328 ntBASIC1.96□□□□□ -2.1
TNFP01375 RPS15AP34-201ENST00000487776 387 ntBASIC1.96□□□□□ -2.1
TNFP01375 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TNFP01375 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
TNFP01375 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TNFP01375 RNU6-319P-201ENST00000516025 108 ntBASIC1.96□□□□□ -2.1
TNFP01375 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
TNFP01375 RNU6-295P-201ENST00000516901 104 ntBASIC1.96□□□□□ -2.1
TNFP01375 SUB1P1-201ENST00000524415 382 ntBASIC1.96□□□□□ -2.1
TNFP01375 AC018630.1-201ENST00000541376 925 ntBASIC1.96□□□□□ -2.1
TNFP01375 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFP01375 U73023.1-201ENST00000603134 700 ntBASIC1.96□□□□□ -2.1
TNFP01375 AL354950.1-201ENST00000614150 568 ntBASIC1.96□□□□□ -2.1
TNFP01375 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFP01375 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFP01375 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFP01375 AC005336.3-201ENST00000623833 2679 ntBASIC1.96□□□□□ -2.1
TNFP01375 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
TNFP01375 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
TNFP01375 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFP01375 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFP01375 MIR583-201ENST00000384846 75 ntBASIC1.95□□□□□ -2.1
TNFP01375 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TNFP01375 AC233279.1-201ENST00000455300 423 ntBASIC1.95□□□□□ -2.1
TNFP01375 AC015908.1-201ENST00000478739 476 ntBASIC1.95□□□□□ -2.1
TNFP01375 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.95□□□□□ -2.1
TNFP01375 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFP01375 MTND4P2-201ENST00000507767 1203 ntBASIC1.95□□□□□ -2.1
TNFP01375 AC004062.1-201ENST00000509926 645 ntBASIC1.95□□□□□ -2.1
TNFP01375 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFP01375 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFP01375 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFP01375 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFP01375 AC025754.2-201ENST00000606491 432 ntBASIC1.95□□□□□ -2.1
TNFP01375 AC244517.12-201ENST00000623581 663 ntBASIC1.95□□□□□ -2.1
TNFP01375 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.95□□□□□ -2.1
TNFP01375 ZNF37BP-203ENST00000452306 1352 ntBASIC1.95□□□□□ -2.1
TNFP01375 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
TNFP01375 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
TNFP01375 RNA5SP252-201ENST00000391131 119 ntBASIC1.94□□□□□ -2.1
TNFP01375 DHFRP5-201ENST00000406944 564 ntBASIC1.94□□□□□ -2.1
TNFP01375 MIR1250-201ENST00000408098 113 ntBASIC1.94□□□□□ -2.1
TNFP01375 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.94□□□□□ -2.1
TNFP01375 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
TNFP01375 RPL7P37-201ENST00000425095 738 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC096632.1-201ENST00000427395 310 ntBASIC1.94□□□□□ -2.1
TNFP01375 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.94□□□□□ -2.1
TNFP01375 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.94□□□□□ -2.1
TNFP01375 USP9YP8-201ENST00000441913 500 ntBASIC1.94□□□□□ -2.1
TNFP01375 IFNA11P-201ENST00000446352 526 ntBASIC1.94□□□□□ -2.1
TNFP01375 snoU13.4-201ENST00000458916 104 ntBASIC1.94□□□□□ -2.1
TNFP01375 RNA5SP310-201ENST00000459084 116 ntBASIC1.94□□□□□ -2.1
TNFP01375 RBM43P1-201ENST00000476891 1081 ntBASIC1.94□□□□□ -2.1
TNFP01375 RPL23AP70-201ENST00000483361 460 ntBASIC1.94□□□□□ -2.1
TNFP01375 GZMAP1-201ENST00000503054 631 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFP01375 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFP01375 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFP01375 RNU6-237P-201ENST00000515985 71 ntBASIC1.94□□□□□ -2.1
TNFP01375 RNU6-548P-201ENST00000517083 115 ntBASIC1.94□□□□□ -2.1
TNFP01375 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TNFP01375 IGLV3-17-201ENST00000519099 244 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.94□□□□□ -2.1
TNFP01375 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFP01375 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TNFP01375 ISCA1P3-201ENST00000577104 373 ntBASIC1.94□□□□□ -2.1
TNFP01375 GLUD1P4-201ENST00000590914 418 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC008739.2-201ENST00000597006 317 ntBASIC1.94□□□□□ -2.1
TNFP01375 AL133370.2-201ENST00000619934 439 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC092650.2-201ENST00000619984 902 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC007342.9-201ENST00000623877 1385 ntBASIC1.94□□□□□ -2.1
TNFP01375 AC011460.1-201ENST00000636268 1834 ntBASIC1.94□□□□□ -2.1
TNFP01375 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TNFP01375 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
TNFP01375 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TNFP01375 Z82209.1-201ENST00000422141 2135 ntBASIC1.93□□□□□ -2.1
TNFP01375 MIR764-201ENST00000390811 85 ntBASIC1.93□□□□□ -2.1
TNFP01375 AC096533.1-201ENST00000411645 353 ntBASIC1.93□□□□□ -2.1
TNFP01375 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TNFP01375 MORF4L1P6-201ENST00000418771 268 ntBASIC1.93□□□□□ -2.1
TNFP01375 AL121882.1-201ENST00000422893 417 ntBASIC1.93□□□□□ -2.1
TNFP01375 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TNFP01375 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.93□□□□□ -2.1
TNFP01375 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.93□□□□□ -2.1
TNFP01375 AC011753.1-201ENST00000451001 220 ntBASIC1.93□□□□□ -2.1
TNFP01375 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.93□□□□□ -2.1
TNFP01375 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.93□□□□□ -2.1
TNFP01375 RPL30P14-201ENST00000482744 348 ntBASIC1.93□□□□□ -2.1
TNFP01375 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
TNFP01375 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
TNFP01375 SNORA31.20-201ENST00000517111 133 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms