Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC100793.4-201ENST00000613683 429 ntBASIC3.64□□□□□ -1.83
LDLRP01130 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 AC048347.1-201ENST00000624621 427 ntBASIC3.64□□□□□ -1.83
LDLRP01130 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
LDLRP01130 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.64□□□□□ -1.83
LDLRP01130 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
LDLRP01130 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDLRP01130 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDLRP01130 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDLRP01130 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.63□□□□□ -1.83
LDLRP01130 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDLRP01130 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.63□□□□□ -1.83
LDLRP01130 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LDLRP01130 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDLRP01130 AL672167.1-206ENST00000356293 943 ntBASIC3.63□□□□□ -1.83
LDLRP01130 RNU6-500P-201ENST00000362349 107 ntBASIC3.63□□□□□ -1.83
LDLRP01130 RNU4-21P-201ENST00000362802 126 ntBASIC3.63□□□□□ -1.83
LDLRP01130 Y_RNA.359-201ENST00000365498 102 ntBASIC3.63□□□□□ -1.83
LDLRP01130 U8.11-201ENST00000384699 133 ntBASIC3.63□□□□□ -1.83
LDLRP01130 U8.12-201ENST00000384701 133 ntBASIC3.63□□□□□ -1.83
LDLRP01130 RNU6-328P-201ENST00000390887 106 ntBASIC3.63□□□□□ -1.83
LDLRP01130 MIR320C1-201ENST00000408566 88 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
LDLRP01130 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.63□□□□□ -1.83
LDLRP01130 MTCYBP24-201ENST00000420387 1106 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
LDLRP01130 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC002381.1-201ENST00000447049 280 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.63□□□□□ -1.83
LDLRP01130 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.63□□□□□ -1.83
LDLRP01130 BTF3P5-201ENST00000457252 467 ntBASIC3.63□□□□□ -1.83
LDLRP01130 U8.18-201ENST00000459285 133 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC023424.2-201ENST00000493479 777 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.63□□□□□ -1.83
LDLRP01130 AC074250.1-201ENST00000511117 192 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.63□□□□□ -1.83
LDLRP01130 RNA5SP216-201ENST00000516111 123 ntBASIC3.63□□□□□ -1.83
LDLRP01130 RNU6-27P-201ENST00000516146 107 ntBASIC3.63□□□□□ -1.83
LDLRP01130 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.63□□□□□ -1.83
LDLRP01130 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.63□□□□□ -1.83
LDLRP01130 IGKV2D-19-201ENST00000523346 262 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.63□□□□□ -1.83
LDLRP01130 MTND4LP18-201ENST00000526864 291 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.63□□□□□ -1.83
LDLRP01130 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.63□□□□□ -1.83
LDLRP01130 AL133241.1-201ENST00000556832 487 ntBASIC3.63□□□□□ -1.83
LDLRP01130 MIR5195-201ENST00000583555 115 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.63□□□□□ -1.83
LDLRP01130 AL669831.4-202ENST00000590817 238 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AC079089.3-201ENST00000603094 673 ntBASIC3.63□□□□□ -1.83
LDLRP01130 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.63□□□□□ -1.83
LDLRP01130 AC008443.7-201ENST00000622195 246 ntBASIC3.63□□□□□ -1.83
LDLRP01130 FP236240.3-201ENST00000623061 327 ntBASIC3.63□□□□□ -1.83
LDLRP01130 U6.105-201ENST00000637379 88 ntBASIC3.63□□□□□ -1.83
LDLRP01130 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LDLRP01130 MTND5P1-201ENST00000445440 1375 ntBASIC3.63□□□□□ -1.83
LDLRP01130 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDLRP01130 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDLRP01130 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.62□□□□□ -1.83
LDLRP01130 Y_RNA.6-201ENST00000362350 114 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RNA5SP399-201ENST00000364003 117 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RNU6-343P-201ENST00000364709 104 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RNU6-1119P-201ENST00000384349 108 ntBASIC3.62□□□□□ -1.83
LDLRP01130 U3.29-201ENST00000391296 212 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RPL21P17-201ENST00000397467 475 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RAP1BP3-201ENST00000407180 549 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RNA5SP56-201ENST00000410277 118 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RN7SKP142-201ENST00000411236 328 ntBASIC3.62□□□□□ -1.83
LDLRP01130 CDK8P2-201ENST00000415020 547 ntBASIC3.62□□□□□ -1.83
LDLRP01130 SYF2P2-201ENST00000417620 583 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AP000907.1-201ENST00000428428 510 ntBASIC3.62□□□□□ -1.83
LDLRP01130 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 MTCYBP45-201ENST00000435243 565 ntBASIC3.62□□□□□ -1.83
LDLRP01130 UBE2FP3-201ENST00000436366 524 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RBMX2P4-201ENST00000441256 376 ntBASIC3.62□□□□□ -1.83
LDLRP01130 PAXBP1P1-201ENST00000449315 447 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.62□□□□□ -1.83
LDLRP01130 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.62□□□□□ -1.83
LDLRP01130 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.62□□□□□ -1.83
LDLRP01130 PPIAP15-201ENST00000479662 484 ntBASIC3.62□□□□□ -1.83
LDLRP01130 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 RPL9P33-201ENST00000484311 566 ntBASIC3.62□□□□□ -1.83
LDLRP01130 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC093853.1-201ENST00000515689 483 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC087276.1-201ENST00000529659 480 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AP003385.6-201ENST00000531603 374 ntBASIC3.62□□□□□ -1.83
LDLRP01130 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 OR6C7P-201ENST00000547875 934 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.62□□□□□ -1.83
LDLRP01130 AC068135.2-201ENST00000569293 1028 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.62□□□□□ -1.83
LDLRP01130 AC136618.2-201ENST00000575091 400 ntBASIC3.62□□□□□ -1.83
LDLRP01130 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.62□□□□□ -1.83
LDLRP01130 AC087683.1-201ENST00000591187 441 ntBASIC3.62□□□□□ -1.83
LDLRP01130 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms