Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 Y_RNA.573-201ENST00000384763 105 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TOP3BO95985 AL121972.1-201ENST00000402023 252 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RNU4-55P-201ENST00000410731 137 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC069218.2-201ENST00000411665 344 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RAC1P3-201ENST00000416129 580 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP3BO95985 AL358934.1-201ENST00000432346 324 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.1□□□□□ -1.75
TOP3BO95985 CYCSP43-201ENST00000438233 310 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RABEPKP1-201ENST00000440529 1026 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 AL590365.1-201ENST00000450788 243 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 TRBV26-201ENST00000456572 344 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 RPS15AP17-201ENST00000470598 390 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.1□□□□□ -1.75
TOP3BO95985 FAM172BP-201ENST00000487497 1089 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC012170.1-201ENST00000495139 359 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP3BO95985 HMGB1P29-201ENST00000505659 499 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC093809.1-201ENST00000509155 340 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP3BO95985 AC104057.1-201ENST00000515547 497 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RNA5SP73-201ENST00000516744 108 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RN7SKP82-201ENST00000516786 223 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 OR5AP1P-201ENST00000529730 940 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC013828.2-201ENST00000532487 235 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP3BO95985 CENPUP2-201ENST00000555897 1186 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 AL391840.1-201ENST00000571144 367 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 RPL23AP87-202ENST00000573039 466 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 UBE2V2P2-201ENST00000587677 504 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 AC060780.3-201ENST00000589464 80 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC087045.1-201ENST00000605856 382 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AC007390.2-201ENST00000606229 3803 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AL020991.1-201ENST00000612314 373 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP3BO95985 AL354798.1-201ENST00000622505 329 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 AL359697.1-201ENST00000624879 587 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP3BO95985 U6.101-201ENST00000637707 76 ntBASIC4.1□□□□□ -1.75
TOP3BO95985 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP3BO95985 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TOP3BO95985 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP3BO95985 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP3BO95985 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOP3BO95985 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TOP3BO95985 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 Y_RNA.89-201ENST00000363031 102 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 RNU6-1243P-201ENST00000364028 107 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 Y_RNA.295-201ENST00000364918 102 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP3BO95985 PTMAP5-201ENST00000393073 333 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 EIF5P1-201ENST00000400019 1231 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 NUP35P2-201ENST00000416748 943 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.09□□□□□ -1.75
TOP3BO95985 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TOP3BO95985 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP3BO95985 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.09□□□□□ -1.75
TOP3BO95985 AC109583.1-201ENST00000432156 268 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 MTND6P13-201ENST00000443510 523 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AL118496.2-201ENST00000448300 230 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 GAPDHP17-201ENST00000449858 1001 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 AC024589.1-201ENST00000512207 263 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.09□□□□□ -1.75
TOP3BO95985 AC026403.1-201ENST00000518938 295 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 AC135001.1-201ENST00000544546 283 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.09□□□□□ -1.75
TOP3BO95985 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP3BO95985 AL157687.1-201ENST00000554853 619 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 HSPE1P3-201ENST00000559254 309 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AL133457.1-201ENST00000564251 987 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 MIR4307-201ENST00000582802 84 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.09□□□□□ -1.75
TOP3BO95985 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 AC097468.3-201ENST00000607956 456 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.09□□□□□ -1.75
TOP3BO95985 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms