Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-276P-201ENST00000516114 96 ntBASIC3.11□□□□□ -1.91
MBD3O95983 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
MBD3O95983 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MBD3O95983 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.11□□□□□ -1.91
MBD3O95983 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD3O95983 SLC2A13P1-201ENST00000531560 322 ntBASIC3.11□□□□□ -1.91
MBD3O95983 AC123904.3-201ENST00000547218 814 ntBASIC3.11□□□□□ -1.91
MBD3O95983 CR383656.7-201ENST00000548164 174 ntBASIC3.11□□□□□ -1.91
MBD3O95983 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD3O95983 YWHAZP1-201ENST00000556286 722 ntBASIC3.11□□□□□ -1.91
MBD3O95983 AC053481.3-201ENST00000577881 843 ntBASIC3.11□□□□□ -1.91
MBD3O95983 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
MBD3O95983 AC009220.3-201ENST00000604318 586 ntBASIC3.11□□□□□ -1.91
MBD3O95983 AF129408.1-201ENST00000608767 431 ntBASIC3.11□□□□□ -1.91
MBD3O95983 AC025588.4-201ENST00000615802 908 ntBASIC3.11□□□□□ -1.91
MBD3O95983 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MBD3O95983 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MBD3O95983 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
MBD3O95983 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.11□□□□□ -1.91
MBD3O95983 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MBD3O95983 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.1□□□□□ -1.91
MBD3O95983 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
MBD3O95983 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
MBD3O95983 RNU6-882P-201ENST00000391025 103 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC025750.1-201ENST00000399891 379 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL161449.1-201ENST00000414531 1199 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.1□□□□□ -1.91
MBD3O95983 AC007742.1-201ENST00000425789 329 ntBASIC3.1□□□□□ -1.91
MBD3O95983 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.1□□□□□ -1.91
MBD3O95983 ELOCP26-201ENST00000436067 329 ntBASIC3.1□□□□□ -1.91
MBD3O95983 HSPE1P28-201ENST00000443139 211 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
MBD3O95983 MTCO2P25-201ENST00000447065 681 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL359073.1-201ENST00000448036 403 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL589880.1-201ENST00000448271 287 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL353691.1-201ENST00000451332 387 ntBASIC3.1□□□□□ -1.91
MBD3O95983 OR6K1P-201ENST00000456766 971 ntBASIC3.1□□□□□ -1.91
MBD3O95983 RN7SL542P-201ENST00000467147 294 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AP001025.2-201ENST00000490908 477 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC006445.1-201ENST00000491925 405 ntBASIC3.1□□□□□ -1.91
MBD3O95983 OR4G11P-201ENST00000492842 939 ntBASIC3.1□□□□□ -1.91
MBD3O95983 RPS27P27-201ENST00000498779 255 ntBASIC3.1□□□□□ -1.91
MBD3O95983 HMGB1P28-201ENST00000507778 552 ntBASIC3.1□□□□□ -1.91
MBD3O95983 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MBD3O95983 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC009812.2-201ENST00000517657 457 ntBASIC3.1□□□□□ -1.91
MBD3O95983 ERHP1-201ENST00000523006 310 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC239860.2-201ENST00000525886 270 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC005832.3-201ENST00000537929 631 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.1□□□□□ -1.91
MBD3O95983 AC096947.1-201ENST00000603233 470 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AC009570.1-201ENST00000609599 745 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL596245.1-201ENST00000618994 362 ntBASIC3.1□□□□□ -1.91
MBD3O95983 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.1□□□□□ -1.91
MBD3O95983 AC004808.1-201ENST00000627671 721 ntBASIC3.1□□□□□ -1.91
MBD3O95983 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.1□□□□□ -1.91
MBD3O95983 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.1□□□□□ -1.91
MBD3O95983 CUL1P1-201ENST00000509510 2425 ntBASIC3.1□□□□□ -1.91
MBD3O95983 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
MBD3O95983 MTCO1P12-201ENST00000414273 1543 ntBASIC3.09□□□□□ -1.91
MBD3O95983 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.09□□□□□ -1.91
MBD3O95983 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.91
MBD3O95983 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
MBD3O95983 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MBD3O95983 MTATP6P27-201ENST00000416987 621 ntBASIC3.09□□□□□ -1.91
MBD3O95983 MTCO2P5-201ENST00000422621 426 ntBASIC3.09□□□□□ -1.91
MBD3O95983 MTATP6P4-201ENST00000427725 675 ntBASIC3.09□□□□□ -1.91
MBD3O95983 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MBD3O95983 MTCO3P11-201ENST00000455103 774 ntBASIC3.09□□□□□ -1.91
MBD3O95983 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC087190.1-201ENST00000484462 480 ntBASIC3.09□□□□□ -1.91
MBD3O95983 RPL21P131-201ENST00000497298 483 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD3O95983 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.09□□□□□ -1.91
MBD3O95983 SNORA74D-201ENST00000516404 141 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC023632.4-201ENST00000517783 191 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MBD3O95983 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.09□□□□□ -1.91
MBD3O95983 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD3O95983 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.09□□□□□ -1.91
MBD3O95983 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD3O95983 VN1R83P-201ENST00000595685 445 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC024153.1-201ENST00000603103 365 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC021749.1-201ENST00000604322 607 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AL022099.1-201ENST00000604551 712 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AL031176.1-201ENST00000604554 466 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.09□□□□□ -1.91
MBD3O95983 AC243773.3-201ENST00000613270 256 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AL138880.2-201ENST00000616214 239 ntBASIC3.09□□□□□ -1.91
MBD3O95983 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AL121895.2-201ENST00000619558 447 ntBASIC3.09□□□□□ -1.91
MBD3O95983 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MBD3O95983 AL356863.1-201ENST00000623378 1080 ntBASIC3.09□□□□□ -1.91
MBD3O95983 AC079228.1-201ENST00000624774 1049 ntBASIC3.09□□□□□ -1.91
MBD3O95983 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.09□□□□□ -1.91
MBD3O95983 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MBD3O95983 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.09□□□□□ -1.92
MBD3O95983 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MBD3O95983 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms