Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 Y_RNA.670-201ENST00000516255 105 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RN7SKP277-201ENST00000516895 283 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AC109635.4-202ENST00000531666 412 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AC011611.5-201ENST00000552477 578 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 MIR3199-1-201ENST00000582434 88 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AC034102.8-201ENST00000615146 484 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL138880.2-201ENST00000616214 239 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.61□□□□□ -2.15
ABCA1O95477 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ABCA1O95477 U8.9-201ENST00000365667 134 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA1O95477 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ABCA1O95477 FABP5P13-201ENST00000452144 328 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 MLLT10P2-201ENST00000506434 249 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RN7SKP96-201ENST00000516948 297 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.61□□□□□ -2.15
ABCA1O95477 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.61□□□□□ -2.15
ABCA1O95477 AP001029.3-201ENST00000588063 596 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ABCA1O95477 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.61□□□□□ -2.15
ABCA1O95477 AC068790.3-201ENST00000602988 553 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RPP40P2-201ENST00000603596 712 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AC009220.3-201ENST00000604318 586 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL049779.4-201ENST00000604500 156 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL121917.1-203ENST00000605534 577 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 HMGN2P28-201ENST00000606102 262 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.61□□□□□ -2.15
ABCA1O95477 METTL21EP-201ENST00000298105 713 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 MIR607-201ENST00000385241 96 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 DNAJC19P6-201ENST00000401853 280 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AL021407.1-201ENST00000404531 386 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA1O95477 SDR42E1P3-201ENST00000438345 502 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 RPL7P5-201ENST00000471472 736 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.6□□□□□ -2.15
ABCA1O95477 AC068781.1-201ENST00000488231 618 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.6□□□□□ -2.15
ABCA1O95477 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ABCA1O95477 MTCYBP37-201ENST00000510642 1133 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.6□□□□□ -2.15
ABCA1O95477 RNA5SP480-201ENST00000516840 109 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA1O95477 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA1O95477 AP003385.6-201ENST00000531603 374 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.6□□□□□ -2.15
ABCA1O95477 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 SNRPGP19-201ENST00000603826 189 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 snoU13.31-201ENST00000607291 104 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AL391813.2-201ENST00000609113 322 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 OR1S1-201ENST00000624470 978 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.6□□□□□ -2.15
ABCA1O95477 RNU6-167P-201ENST00000384292 106 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 BTF3P4-201ENST00000418852 495 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC008173.1-201ENST00000418901 264 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.6□□□□□ -2.15
ABCA1O95477 AL513343.1-201ENST00000451818 792 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC104435.1-201ENST00000483483 166 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA1O95477 AC117532.1-201ENST00000514638 323 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA1O95477 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.6□□□□□ -2.15
ABCA1O95477 AP005136.1-201ENST00000579765 429 ntBASIC1.6□□□□□ -2.15
ABCA1O95477 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.6□□□□□ -2.15
ABCA1O95477 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA1O95477 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.6□□□□□ -2.15
ABCA1O95477 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
ABCA1O95477 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.59□□□□□ -2.15
ABCA1O95477 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA1O95477 RPS7P9-201ENST00000414704 586 ntBASIC1.59□□□□□ -2.15
ABCA1O95477 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA1O95477 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA1O95477 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.59□□□□□ -2.15
ABCA1O95477 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA1O95477 RPL30P11-201ENST00000495304 339 ntBASIC1.59□□□□□ -2.15
ABCA1O95477 AC005840.1-201ENST00000498412 377 ntBASIC1.59□□□□□ -2.15
ABCA1O95477 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA1O95477 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.59□□□□□ -2.15
ABCA1O95477 MTCO2P32-201ENST00000514865 403 ntBASIC1.59□□□□□ -2.15
ABCA1O95477 AC019159.1-201ENST00000605094 187 ntBASIC1.59□□□□□ -2.15
ABCA1O95477 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.59□□□□□ -2.15
ABCA1O95477 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.59□□□□□ -2.15
ABCA1O95477 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.59□□□□□ -2.15
ABCA1O95477 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.59□□□□□ -2.15
ABCA1O95477 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ABCA1O95477 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ABCA1O95477 Y_RNA.191-201ENST00000363972 113 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 RNA5SP37-201ENST00000365420 130 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 MIR613-201ENST00000385248 95 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 RPL23AP47-201ENST00000408017 460 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.59□□□□□ -2.16
ABCA1O95477 RPL34P26-201ENST00000445636 354 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 MTAPP1-201ENST00000489154 819 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.59□□□□□ -2.16
ABCA1O95477 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.59□□□□□ -2.16
ABCA1O95477 AC239860.2-201ENST00000525886 270 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 AC126177.3-201ENST00000551839 688 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 AC110588.1-201ENST00000559699 137 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 AC107954.1-201ENST00000565906 727 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms