Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNORA67.4-201ENST00000384688 142 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 U3.26-201ENST00000391236 204 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 RPS4XP8-201ENST00000402039 771 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 OR51A3P-201ENST00000413596 924 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 SFR1P2-201ENST00000421841 730 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 PTP4A1P7-201ENST00000423476 514 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 C1DP1-201ENST00000426049 402 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC010285.1-201ENST00000470580 392 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC011352.3-201ENST00000505162 593 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 KLHL2P1-201ENST00000508691 521 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC093752.1-206ENST00000511823 336 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC112673.1-201ENST00000513168 575 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 HIGD1AP6-201ENST00000521833 279 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC118942.1-201ENST00000529674 1035 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC087897.1-201ENST00000550134 156 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC122134.1-202ENST00000569111 1201 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AC103881.1-201ENST00000603476 538 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 RPAP2P1-201ENST00000603626 1168 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AL158050.2-201ENST00000605336 568 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 AL139022.2-201ENST00000606934 443 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 FTLP6-201ENST00000355274 422 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 OR5H15-201ENST00000383696 930 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 RNU6-549P-201ENST00000384433 107 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 MIR16-1-201ENST00000385271 89 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AL031679.1-201ENST00000400616 525 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC233728.2-201ENST00000425348 757 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 RPL36P19-201ENST00000430744 301 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC087879.1-201ENST00000474343 374 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 SNORA31.20-201ENST00000517111 133 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 IGKV2D-36-201ENST00000518643 226 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 MIR3162-201ENST00000581818 82 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC090330.1-201ENST00000588646 764 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AL022067.1-201ENST00000602426 454 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC002487.1-201ENST00000604565 994 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC093673.2-201ENST00000609674 331 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC104763.3-201ENST00000613765 618 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC091046.2-201ENST00000620775 665 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC010608.3-201ENST00000625048 527 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 AC090897.3-201ENST00000636973 1157 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 SGO1P1-201ENST00000603525 1447 ntBASIC2.75□□□□□ -1.97
CTDNEP1O95476 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
CTDNEP1O95476 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTDNEP1O95476 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 RPS7P9-201ENST00000414704 586 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 OFD1P18Y-201ENST00000420889 959 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 MTCYBP15-201ENST00000433123 1127 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC010881.1-201ENST00000433830 235 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 PTGES3P1-201ENST00000439531 483 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 RPL21P2-201ENST00000440049 481 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC002542.1-201ENST00000440683 193 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AL034418.1-201ENST00000448675 860 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC104472.2-201ENST00000469035 601 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTDNEP1O95476 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC109471.1-201ENST00000511631 612 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC104986.1-201ENST00000517978 436 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 HMGB1P1-201ENST00000522557 636 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC091057.3-201ENST00000602684 733 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC011458.1-201ENST00000604034 617 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC069431.2-201ENST00000604149 1099 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AL160281.1-201ENST00000605307 311 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC144521.1-201ENST00000607148 956 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AP005137.2-201ENST00000609238 400 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 AC131902.3-201ENST00000611767 581 ntBASIC2.74□□□□□ -1.97
CTDNEP1O95476 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
CTDNEP1O95476 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTDNEP1O95476 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms