Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AL356967.1-201ENST00000406305 431 ntBASIC1.54□□□□□ -2.16
SIX6O95475 RNU4-78P-201ENST00000410940 126 ntBASIC1.54□□□□□ -2.16
SIX6O95475 RNA5SP184-201ENST00000411071 108 ntBASIC1.54□□□□□ -2.16
SIX6O95475 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 NUP35P1-201ENST00000422734 947 ntBASIC1.54□□□□□ -2.16
SIX6O95475 AL645638.1-201ENST00000440519 361 ntBASIC1.54□□□□□ -2.16
SIX6O95475 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.54□□□□□ -2.16
SIX6O95475 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 FAM172BP-201ENST00000487497 1089 ntBASIC1.54□□□□□ -2.16
SIX6O95475 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 AC108120.2-201ENST00000512973 294 ntBASIC1.54□□□□□ -2.16
SIX6O95475 AC133963.2-201ENST00000513686 578 ntBASIC1.54□□□□□ -2.16
SIX6O95475 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
SIX6O95475 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
SIX6O95475 AL033523.1-201ENST00000605153 153 ntBASIC1.54□□□□□ -2.16
SIX6O95475 BX323046.1-201ENST00000610145 535 ntBASIC1.54□□□□□ -2.16
SIX6O95475 AL355810.1-201ENST00000614629 552 ntBASIC1.54□□□□□ -2.16
SIX6O95475 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SIX6O95475 AL360181.4-201ENST00000621752 134 ntBASIC1.54□□□□□ -2.16
SIX6O95475 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.54□□□□□ -2.16
SIX6O95475 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SIX6O95475 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SIX6O95475 ZNF90P1-201ENST00000480493 1951 ntBASIC1.54□□□□□ -2.16
SIX6O95475 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.54□□□□□ -2.16
SIX6O95475 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SIX6O95475 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SIX6O95475 RNU6-374P-201ENST00000364146 108 ntBASIC1.53□□□□□ -2.16
SIX6O95475 SNORA36C-201ENST00000384289 132 ntBASIC1.53□□□□□ -2.16
SIX6O95475 RNU6-167P-201ENST00000384292 106 ntBASIC1.53□□□□□ -2.16
SIX6O95475 ATF1P1-201ENST00000406040 927 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AL450338.1-201ENST00000407987 512 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 AL513175.1-201ENST00000431492 780 ntBASIC1.53□□□□□ -2.16
SIX6O95475 RPL35AP22-201ENST00000436855 335 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 NSRP1P1-201ENST00000444067 1693 ntBASIC1.53□□□□□ -2.16
SIX6O95475 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.53□□□□□ -2.16
SIX6O95475 MTND4P27-201ENST00000450813 1354 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.53□□□□□ -2.16
SIX6O95475 AC233279.1-201ENST00000455300 423 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.53□□□□□ -2.16
SIX6O95475 AC093281.2-201ENST00000510153 597 ntBASIC1.53□□□□□ -2.16
SIX6O95475 IGKV2D-36-201ENST00000518643 226 ntBASIC1.53□□□□□ -2.16
SIX6O95475 HMGB1P46-201ENST00000520062 610 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 AP001804.3-201ENST00000525146 880 ntBASIC1.53□□□□□ -2.16
SIX6O95475 CASP1P1-201ENST00000526345 212 ntBASIC1.53□□□□□ -2.16
SIX6O95475 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SIX6O95475 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX6O95475 NRBF2P5-201ENST00000603087 788 ntBASIC1.53□□□□□ -2.16
SIX6O95475 XIAPP1-201ENST00000603162 600 ntBASIC1.53□□□□□ -2.16
SIX6O95475 HSPE1P7-201ENST00000604681 321 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AC007938.3-201ENST00000604965 623 ntBASIC1.53□□□□□ -2.16
SIX6O95475 AC005021.1-201ENST00000608730 355 ntBASIC1.53□□□□□ -2.16
SIX6O95475 RNU6-461P-201ENST00000364195 107 ntBASIC1.52□□□□□ -2.17
SIX6O95475 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.52□□□□□ -2.17
SIX6O95475 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.52□□□□□ -2.17
SIX6O95475 CYCSP45-201ENST00000402289 315 ntBASIC1.52□□□□□ -2.17
SIX6O95475 SNORD23.1-201ENST00000408212 104 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AL445685.2-201ENST00000422551 342 ntBASIC1.52□□□□□ -2.17
SIX6O95475 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.52□□□□□ -2.17
SIX6O95475 OR4K11P-201ENST00000431829 904 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AL445687.1-201ENST00000439946 251 ntBASIC1.52□□□□□ -2.17
SIX6O95475 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.52□□□□□ -2.17
SIX6O95475 HIGD1AP2-201ENST00000446367 280 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AL358232.1-201ENST00000448030 501 ntBASIC1.52□□□□□ -2.17
SIX6O95475 RNU7-26P-201ENST00000458980 63 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.52□□□□□ -2.17
SIX6O95475 RPL7P18-201ENST00000478965 734 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.52□□□□□ -2.17
SIX6O95475 AC108157.1-201ENST00000510511 539 ntBASIC1.52□□□□□ -2.17
SIX6O95475 SNORA31.8-201ENST00000516327 108 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.52□□□□□ -2.17
SIX6O95475 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.52□□□□□ -2.17
SIX6O95475 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.52□□□□□ -2.17
SIX6O95475 SNRPGP18-201ENST00000553000 214 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC010546.1-201ENST00000569391 485 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC090666.1-201ENST00000578241 445 ntBASIC1.52□□□□□ -2.17
SIX6O95475 MIR4429-201ENST00000580105 73 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.52□□□□□ -2.17
SIX6O95475 AP001330.4-201ENST00000604350 154 ntBASIC1.52□□□□□ -2.17
SIX6O95475 BNIP3P7-201ENST00000605641 516 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC012557.1-201ENST00000607115 611 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC096577.2-201ENST00000611455 153 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AL442067.2-201ENST00000614033 363 ntBASIC1.52□□□□□ -2.17
SIX6O95475 SDR42E1P2-201ENST00000614861 481 ntBASIC1.52□□□□□ -2.17
SIX6O95475 HMGB1P24-202ENST00000615653 685 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AL162233.1-201ENST00000620014 944 ntBASIC1.52□□□□□ -2.17
SIX6O95475 SDR42E1P4-201ENST00000620894 481 ntBASIC1.52□□□□□ -2.17
SIX6O95475 YWHAEP7-203ENST00000622054 312 ntBASIC1.52□□□□□ -2.17
SIX6O95475 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.52□□□□□ -2.17
SIX6O95475 AC073346.2-201ENST00000624724 2058 ntBASIC1.52□□□□□ -2.17
SIX6O95475 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SIX6O95475 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms