Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
USH2AO75445 IGLVIV-53-201ENST00000520107 367 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC0.8□□□□□ -2.28
USH2AO75445 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
USH2AO75445 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
USH2AO75445 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC0.8□□□□□ -2.28
USH2AO75445 FAM35CP-201ENST00000554755 2470 ntBASIC0.8□□□□□ -2.28
USH2AO75445 CUL4AP1-201ENST00000514750 1863 ntBASIC0.8□□□□□ -2.28
USH2AO75445 RNA5SP344-201ENST00000411081 104 ntBASIC0.8□□□□□ -2.28
USH2AO75445 RPL31P35-201ENST00000431058 377 ntBASIC0.8□□□□□ -2.28
USH2AO75445 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 GZMAP1-201ENST00000503054 631 ntBASIC0.8□□□□□ -2.28
USH2AO75445 FABP5P5-201ENST00000515537 406 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 SETP7-201ENST00000552169 453 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AC010678.1-201ENST00000614118 713 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 AC009541.1-201ENST00000438279 2662 ntBASIC0.8□□□□□ -2.28
USH2AO75445 RNA5SP296-201ENST00000410523 111 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AMD1P2-201ENST00000412936 992 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC0.8□□□□□ -2.28
USH2AO75445 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 AC009474.2-201ENST00000451383 136 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AP000873.1-201ENST00000463987 400 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AC104564.1-201ENST00000493028 407 ntBASIC0.8□□□□□ -2.28
USH2AO75445 RPS27P27-201ENST00000498779 255 ntBASIC0.8□□□□□ -2.28
USH2AO75445 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.8□□□□□ -2.28
USH2AO75445 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 BX664608.1-201ENST00000610519 487 ntBASIC0.8□□□□□ -2.28
USH2AO75445 AC087588.2-201ENST00000617667 426 ntBASIC0.8□□□□□ -2.28
USH2AO75445 Y_RNA.488-201ENST00000384403 102 ntBASIC0.79□□□□□ -2.28
USH2AO75445 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AL356806.1-201ENST00000422524 916 ntBASIC0.79□□□□□ -2.28
USH2AO75445 MTATP6P11-201ENST00000428071 670 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC0.79□□□□□ -2.28
USH2AO75445 HMGB1P26-201ENST00000452520 628 ntBASIC0.79□□□□□ -2.28
USH2AO75445 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
USH2AO75445 AC107393.1-201ENST00000512403 346 ntBASIC0.79□□□□□ -2.28
USH2AO75445 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.79□□□□□ -2.28
USH2AO75445 AC244517.12-201ENST00000623581 663 ntBASIC0.79□□□□□ -2.28
USH2AO75445 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
USH2AO75445 MFF-206ENST00000392059 1710 ntTSL 5 BASIC0.79□□□□□ -2.28
USH2AO75445 AL592437.2-201ENST00000421655 2434 ntBASIC0.79□□□□□ -2.28
USH2AO75445 RNU6-249P-201ENST00000363016 102 ntBASIC0.79□□□□□ -2.28
USH2AO75445 Y_RNA.136-201ENST00000363444 102 ntBASIC0.79□□□□□ -2.28
USH2AO75445 MIR216A-201ENST00000385063 110 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AC011979.1-201ENST00000472300 483 ntBASIC0.79□□□□□ -2.28
USH2AO75445 KATNBL1P4-201ENST00000503545 918 ntBASIC0.79□□□□□ -2.28
USH2AO75445 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC0.79□□□□□ -2.28
USH2AO75445 MTATP6P3-201ENST00000581686 676 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC0.79□□□□□ -2.28
USH2AO75445 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC0.79□□□□□ -2.28
USH2AO75445 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC0.79□□□□□ -2.28
USH2AO75445 MIR373-201ENST00000362273 69 ntBASIC0.79□□□□□ -2.28
USH2AO75445 Y_RNA.85-201ENST00000363014 111 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AL035405.1-201ENST00000400795 710 ntBASIC0.79□□□□□ -2.28
USH2AO75445 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC0.79□□□□□ -2.28
USH2AO75445 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
USH2AO75445 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
USH2AO75445 CALM1P1-201ENST00000442082 433 ntBASIC0.79□□□□□ -2.28
USH2AO75445 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.79□□□□□ -2.28
USH2AO75445 TAS2R15P-201ENST00000390674 928 ntBASIC0.79□□□□□ -2.28
USH2AO75445 RAC1P3-201ENST00000416129 580 ntBASIC0.79□□□□□ -2.28
USH2AO75445 HMGN2P19-201ENST00000425149 265 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC0.79□□□□□ -2.28
USH2AO75445 AL138799.3-201ENST00000438968 350 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AL589765.3-201ENST00000446084 462 ntBASIC0.79□□□□□ -2.28
USH2AO75445 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC0.79□□□□□ -2.28
USH2AO75445 AL158032.1-201ENST00000605401 106 ntBASIC0.79□□□□□ -2.28
USH2AO75445 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC0.79□□□□□ -2.28
USH2AO75445 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
USH2AO75445 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 CST2P1-201ENST00000425770 87 ntBASIC0.78□□□□□ -2.28
USH2AO75445 SDR42E1P3-201ENST00000438345 502 ntBASIC0.78□□□□□ -2.28
USH2AO75445 RNU6-717P-201ENST00000459076 104 ntBASIC0.78□□□□□ -2.28
USH2AO75445 RPL7P5-201ENST00000471472 736 ntBASIC0.78□□□□□ -2.28
USH2AO75445 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.78□□□□□ -2.28
USH2AO75445 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC0.78□□□□□ -2.28
USH2AO75445 RNU6ATAC9P-201ENST00000516210 116 ntBASIC0.78□□□□□ -2.28
USH2AO75445 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.78□□□□□ -2.28
USH2AO75445 AC080078.3-201ENST00000605407 463 ntBASIC0.78□□□□□ -2.28
USH2AO75445 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.78□□□□□ -2.28
USH2AO75445 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 AC109486.1-201ENST00000486833 374 ntBASIC0.78□□□□□ -2.28
USH2AO75445 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms