Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-408P-201ENST00000515910 100 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 RNU6-1213P-201ENST00000517075 94 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC015912.2-201ENST00000571053 181 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 OR4K8P-201ENST00000578842 1048 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC104695.3-201ENST00000604052 296 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 HSPE1P14-201ENST00000605812 302 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AC020634.1-201ENST00000608701 549 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AC098479.1-201ENST00000609225 154 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AC123768.4-201ENST00000616244 701 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 CR381572.2-201ENST00000624852 397 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 AL669831.3-213ENST00000636676 183 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC099654.2-201ENST00000433031 1980 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRIM13O60858 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM13O60858 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM13O60858 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 RNU1-20P-201ENST00000363314 162 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 Y_RNA.212-201ENST00000364177 102 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 Y_RNA.396-201ENST00000383949 103 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 RNU6-601P-201ENST00000384540 107 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 MIR454-201ENST00000390180 115 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 RNA5SP372-201ENST00000390836 115 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 Y_RNA.645-201ENST00000391229 102 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AL023807.1-201ENST00000407932 359 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.66□□□□□ -1.66
TRIM13O60858 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 AC096632.1-201ENST00000427395 310 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC137499.1-201ENST00000427602 88 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 RPL23AP50-201ENST00000434149 455 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM13O60858 MTND1P17-201ENST00000448961 204 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM13O60858 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM13O60858 AP000893.1-201ENST00000474462 794 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 RPL23AP65-201ENST00000475608 468 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC072052.1-201ENST00000496556 306 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
TRIM13O60858 AC008638.1-201ENST00000506035 866 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 HIGD1AP14-201ENST00000507617 282 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 AC018797.3-201ENST00000513388 1241 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 Y_RNA.661-201ENST00000516003 99 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 Y_RNA.721-201ENST00000517207 102 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 OR8R1P-201ENST00000543943 764 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC090022.1-201ENST00000546569 311 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 LSM6P2-201ENST00000552208 177 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM13O60858 RN7SL52P-201ENST00000584271 284 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM13O60858 GLUD1P4-201ENST00000590914 418 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 ATP1B3P1-201ENST00000605365 821 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 MIR6861-201ENST00000618657 64 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AC141273.2-201ENST00000618989 130 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 AL049767.1-202ENST00000637826 242 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 AP000756.2-201ENST00000624168 2567 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
TRIM13O60858 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM13O60858 AC121333.1-201ENST00000567488 2709 ntBASIC4.66□□□□□ -1.66
TRIM13O60858 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM13O60858 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM13O60858 RNU6-874P-201ENST00000362390 105 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 SNORD113-7-201ENST00000363762 77 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM13O60858 Y_RNA.512-201ENST00000384518 102 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AL590762.2-201ENST00000395798 571 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 RPS4XP9-201ENST00000405151 780 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 BX323014.1-201ENST00000412876 237 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC099336.2-201ENST00000422457 254 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AL645608.4-201ENST00000423619 154 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 CHIAP3-201ENST00000423668 1133 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM13O60858 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms