Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNND1O60716 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CTNND1O60716 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNND1O60716 JKAMPP1-201ENST00000413804 919 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 EI24P1-201ENST00000416584 867 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 RABEPKP1-201ENST00000440529 1026 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNND1O60716 RAC1P7-201ENST00000445367 377 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 RPS17P13-201ENST00000448974 407 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNND1O60716 GAPDHP17-201ENST00000449858 1001 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC234775.1-201ENST00000454247 670 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 MTND1P3-201ENST00000484956 952 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 RPS26P15-201ENST00000488067 348 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC017037.1-201ENST00000508460 471 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC110768.1-201ENST00000509222 400 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC104619.4-201ENST00000510773 249 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 RNU2-46P-201ENST00000517038 113 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC022695.1-201ENST00000522089 237 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 MTCYBP20-201ENST00000524239 1129 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNND1O60716 AP003181.2-201ENST00000528941 181 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC012182.1-201ENST00000570133 895 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.5□□□□□ -1.69
CTNND1O60716 AC010928.3-201ENST00000587712 541 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC068790.5-201ENST00000602741 355 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AL136363.2-201ENST00000604173 851 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 U3.45-201ENST00000607547 219 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNND1O60716 BX664608.1-201ENST00000610519 487 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC233309.1-201ENST00000619522 751 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 RMST_9.1-201ENST00000619945 193 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC009268.2-201ENST00000621925 457 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 AC112204.3-201ENST00000623822 332 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNND1O60716 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNND1O60716 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNND1O60716 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNND1O60716 AL645937.1-201ENST00000641739 1652 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CTNND1O60716 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.5□□□□□ -1.69
CTNND1O60716 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 FARSBP1-201ENST00000435808 1778 ntBASIC4.5□□□□□ -1.69
CTNND1O60716 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNND1O60716 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNND1O60716 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 RNA5SP235-201ENST00000365411 114 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CTNND1O60716 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CTNND1O60716 SNORA9-201ENST00000384215 133 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 MIR135A2-201ENST00000384854 100 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 MRPL42P2-201ENST00000403169 426 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNND1O60716 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 AL589872.1-201ENST00000426602 288 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 OR4K11P-201ENST00000431829 904 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 MTND1P34-201ENST00000438556 671 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC073614.1-201ENST00000438690 650 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.49□□□□□ -1.69
CTNND1O60716 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNND1O60716 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNND1O60716 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 KLF3P2-201ENST00000465138 268 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 AC078817.1-201ENST00000492623 435 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.49□□□□□ -1.69
CTNND1O60716 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 RN7SKP18-201ENST00000516005 275 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 Y_RNA.672-201ENST00000516289 104 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 SNORA18.6-201ENST00000516792 115 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 AC022880.1-201ENST00000534017 973 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 AL391156.1-201ENST00000554965 554 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNND1O60716 AC087481.2-201ENST00000565492 330 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.49□□□□□ -1.69
CTNND1O60716 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.49□□□□□ -1.69
CTNND1O60716 AC068790.6-201ENST00000602558 258 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC096577.2-201ENST00000611455 153 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC091304.9-201ENST00000612091 226 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AC099842.1-201ENST00000619919 596 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AL773545.4-201ENST00000637262 310 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 U6.105-201ENST00000637379 88 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms