Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RN7SKP222-201ENST00000410651 315 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RN7SKP159-201ENST00000410657 292 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AC092809.3-201ENST00000415453 231 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AC108075.1-201ENST00000424692 529 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 WARS2P1-201ENST00000429678 537 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA3O60609 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 PPIAP3-201ENST00000450588 505 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RNU6-1037P-201ENST00000459571 107 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RPS23P7-201ENST00000466210 444 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RN7SL354P-201ENST00000469282 294 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AC034236.1-201ENST00000469891 373 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RPL36AP41-201ENST00000493820 306 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AC135721.1-201ENST00000497954 479 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA3O60609 RNU6-772P-201ENST00000516042 105 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RN7SKP12-201ENST00000516275 143 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RNA5SP395-201ENST00000516567 118 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 FXNP1-201ENST00000555153 337 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA3O60609 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 RPL23AP88-201ENST00000605759 454 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 uc_338.28-201ENST00000612082 187 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 AL137067.2-201ENST00000621202 131 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.71□□□□□ -1.5
GFRA3O60609 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
GFRA3O60609 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA3O60609 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA3O60609 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA3O60609 AL589993.1-201ENST00000407450 2524 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA3O60609 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA3O60609 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
GFRA3O60609 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA3O60609 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
GFRA3O60609 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA3O60609 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
GFRA3O60609 GUCY1B2-204ENST00000531898 1979 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
GFRA3O60609 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 U3.2-201ENST00000362981 210 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 RN7SKP113-201ENST00000363891 295 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 RNU6-19P-201ENST00000384718 107 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 MIR23B-201ENST00000384832 97 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 SNORA48.7-201ENST00000391302 135 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 U3.36-201ENST00000408418 213 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 RNU6-1025P-201ENST00000410629 104 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AL160275.3-201ENST00000423876 471 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AC004938.1-201ENST00000438468 308 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA3O60609 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 AC009120.1-201ENST00000493458 473 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 IGLV3-6-201ENST00000523937 250 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 AC024940.3-201ENST00000538551 316 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 AC022968.1-201ENST00000567372 442 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 LARP7P3-201ENST00000579888 337 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 RPL23AP78-201ENST00000599928 470 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 MIR8076-201ENST00000611401 83 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AL590099.1-201ENST00000615276 138 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AC007998.5-201ENST00000622938 237 ntBASIC5.7□□□□□ -1.5
GFRA3O60609 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA3O60609 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA3O60609 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
GFRA3O60609 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA3O60609 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
GFRA3O60609 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA3O60609 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
GFRA3O60609 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
GFRA3O60609 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA3O60609 Y_RNA.337-201ENST00000365312 102 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 Y_RNA.570-201ENST00000384750 101 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms