Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GRIN3BO60391 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GRIN3BO60391 OR1S2-201ENST00000302592 978 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 RNY3P13-201ENST00000365542 102 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AP000580.1-201ENST00000404439 358 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 RN7SKP140-201ENST00000411196 284 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.41□□□□□ -1.54
GRIN3BO60391 VN1R36P-201ENST00000414936 291 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.41□□□□□ -1.54
GRIN3BO60391 FTH1P1-201ENST00000437933 532 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC073415.1-201ENST00000449240 153 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 NIPA2P5-201ENST00000452282 464 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC007967.1-201ENST00000455422 1159 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC108059.3-201ENST00000456388 214 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AL139099.1-201ENST00000497398 403 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.41□□□□□ -1.54
GRIN3BO60391 AC110792.2-201ENST00000510278 224 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 OR4P1P-201ENST00000530808 1136 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 HPRT1P3-201ENST00000539521 576 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AL355375.2-201ENST00000574825 175 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.41□□□□□ -1.54
GRIN3BO60391 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.41□□□□□ -1.54
GRIN3BO60391 Y_RNA.812-201ENST00000610788 101 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.41□□□□□ -1.54
GRIN3BO60391 Y_RNA.784-201ENST00000613803 101 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC040896.1-201ENST00000613819 479 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 Y_RNA.787-201ENST00000616522 101 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 Y_RNA.780-201ENST00000617336 101 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 Y_RNA.801-201ENST00000619005 101 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC015967.1-201ENST00000619893 476 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AC079684.1-201ENST00000621405 437 ntBASIC5.41□□□□□ -1.54
GRIN3BO60391 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.41□□□□□ -1.54
GRIN3BO60391 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
GRIN3BO60391 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
GRIN3BO60391 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.41□□□□□ -1.54
GRIN3BO60391 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GRIN3BO60391 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
GRIN3BO60391 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
GRIN3BO60391 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
GRIN3BO60391 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GRIN3BO60391 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GRIN3BO60391 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GRIN3BO60391 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AC100778.3-201ENST00000580060 1750 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GRIN3BO60391 Y_RNA.367-201ENST00000365544 101 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 MIR218-2-201ENST00000385006 110 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 MT-TR-201ENST00000387439 65 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AL590004.1-201ENST00000405321 300 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.4□□□□□ -1.54
GRIN3BO60391 RNU2-15P-201ENST00000410692 191 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 MTND3P8-201ENST00000412909 339 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AC068533.1-201ENST00000418542 415 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AL139095.3-201ENST00000419672 1203 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AC091286.1-201ENST00000431233 461 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.4□□□□□ -1.54
GRIN3BO60391 IFNA20P-201ENST00000436840 528 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AL591623.2-201ENST00000449978 222 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AL353691.1-201ENST00000451332 387 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 HMGN2P26-201ENST00000463169 339 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 RPS4XP10-201ENST00000465034 731 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.4□□□□□ -1.54
GRIN3BO60391 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GRIN3BO60391 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AC114797.1-201ENST00000514003 728 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AC006349.1-201ENST00000555526 235 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AC005000.2-201ENST00000605468 310 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.4□□□□□ -1.54
GRIN3BO60391 AC103710.2-201ENST00000609912 942 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 FAM27D1-201ENST00000612308 341 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 MIR1302-1-201ENST00000637932 143 ntBASIC5.4□□□□□ -1.54
GRIN3BO60391 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.4□□□□□ -1.55
GRIN3BO60391 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GRIN3BO60391 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GRIN3BO60391 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.4□□□□□ -1.55
GRIN3BO60391 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GRIN3BO60391 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.4□□□□□ -1.55
GRIN3BO60391 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC004972.1-201ENST00000623934 2209 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 NXPH1-205ENST00000602349 1953 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 U3.11-201ENST00000364476 212 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 Y_RNA.394-201ENST00000383942 103 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 RNU6-193P-201ENST00000410977 107 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 GNG5P5-201ENST00000420444 220 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AL353678.1-201ENST00000422735 741 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AL356276.2-201ENST00000435919 558 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.39□□□□□ -1.55
GRIN3BO60391 AC127537.2-201ENST00000439258 465 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 CYCSP24-201ENST00000445119 316 ntBASIC5.39□□□□□ -1.55
GRIN3BO60391 AC233279.1-201ENST00000455300 423 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms