Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 SNORA74D-201ENST00000516404 141 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 AP000916.1-201ENST00000533869 835 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AL133271.1-201ENST00000538229 291 ntBASIC2.4□□□□□ -2.03
SGCEO43556 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.4□□□□□ -2.03
SGCEO43556 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.4□□□□□ -2.03
SGCEO43556 AC008127.2-201ENST00000549925 1075 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.4□□□□□ -2.03
SGCEO43556 AC009163.5-201ENST00000575421 637 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC103810.1-201ENST00000579873 453 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 AL451007.1-201ENST00000595491 289 ntBASIC2.4□□□□□ -2.03
SGCEO43556 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
SGCEO43556 MTCO1P23-201ENST00000415223 1526 ntBASIC2.4□□□□□ -2.03
SGCEO43556 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SGCEO43556 AC009812.4-201ENST00000569134 1805 ntBASIC2.4□□□□□ -2.03
SGCEO43556 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
SGCEO43556 AL512283.1-201ENST00000606756 1384 ntBASIC2.39□□□□□ -2.03
SGCEO43556 RNU6-582P-201ENST00000362989 107 ntBASIC2.39□□□□□ -2.03
SGCEO43556 RNU6-650P-201ENST00000365658 111 ntBASIC2.39□□□□□ -2.03
SGCEO43556 RNU6-878P-201ENST00000384578 110 ntBASIC2.39□□□□□ -2.03
SGCEO43556 MIR592-201ENST00000384959 97 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AL138827.1-201ENST00000402666 306 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AC092427.1-202ENST00000430569 476 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AC090774.1-201ENST00000435925 246 ntBASIC2.39□□□□□ -2.03
SGCEO43556 CYCSP32-201ENST00000440548 321 ntBASIC2.39□□□□□ -2.03
SGCEO43556 RPS24P13-201ENST00000442520 397 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AL135938.1-201ENST00000443141 297 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.39□□□□□ -2.03
SGCEO43556 snoU13.28-201ENST00000459235 104 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AC080014.1-201ENST00000496877 1201 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.39□□□□□ -2.03
SGCEO43556 SNORA31.11-201ENST00000516528 139 ntBASIC2.39□□□□□ -2.03
SGCEO43556 OR5AK1P-201ENST00000524837 922 ntBASIC2.39□□□□□ -2.03
SGCEO43556 OR4R1P-201ENST00000529879 463 ntBASIC2.39□□□□□ -2.03
SGCEO43556 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.39□□□□□ -2.03
SGCEO43556 SETP7-201ENST00000552169 453 ntBASIC2.39□□□□□ -2.03
SGCEO43556 HMGB1P6-201ENST00000569046 646 ntBASIC2.39□□□□□ -2.03
SGCEO43556 MIR5194-201ENST00000582634 120 ntBASIC2.39□□□□□ -2.03
SGCEO43556 RPL23AP92-201ENST00000603609 255 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AL031176.1-201ENST00000604554 466 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AL161756.2-201ENST00000604597 246 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AC100814.1-201ENST00000606963 623 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AC011890.2-201ENST00000613393 294 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AP001002.2-201ENST00000625137 386 ntBASIC2.39□□□□□ -2.03
SGCEO43556 AL590396.4-201ENST00000636779 956 ntBASIC2.39□□□□□ -2.03
SGCEO43556 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SGCEO43556 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.38□□□□□ -2.03
SGCEO43556 SNORA9-201ENST00000384215 133 ntBASIC2.38□□□□□ -2.03
SGCEO43556 SNORA48.2-201ENST00000390926 124 ntBASIC2.38□□□□□ -2.03
SGCEO43556 AC016769.3-201ENST00000396562 315 ntBASIC2.38□□□□□ -2.03
SGCEO43556 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.38□□□□□ -2.03
SGCEO43556 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 AL365496.1-201ENST00000426885 215 ntBASIC2.38□□□□□ -2.03
SGCEO43556 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.38□□□□□ -2.03
SGCEO43556 AC024082.2-201ENST00000434771 238 ntBASIC2.38□□□□□ -2.03
SGCEO43556 CR769767.1-201ENST00000436337 346 ntBASIC2.38□□□□□ -2.03
SGCEO43556 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 RNU6-420P-201ENST00000458780 107 ntBASIC2.38□□□□□ -2.03
SGCEO43556 RPS27P26-201ENST00000494583 239 ntBASIC2.38□□□□□ -2.03
SGCEO43556 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.38□□□□□ -2.03
SGCEO43556 AC010468.3-201ENST00000508225 458 ntBASIC2.38□□□□□ -2.03
SGCEO43556 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 AC090136.1-201ENST00000520009 240 ntBASIC2.38□□□□□ -2.03
SGCEO43556 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SGCEO43556 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.38□□□□□ -2.03
SGCEO43556 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.38□□□□□ -2.03
SGCEO43556 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.38□□□□□ -2.03
SGCEO43556 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SGCEO43556 OR4G11P-202ENST00000642116 1414 ntBASIC2.38□□□□□ -2.03
SGCEO43556 ZNF833P-201ENST00000424938 1494 ntBASIC2.38□□□□□ -2.03
SGCEO43556 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.38□□□□□ -2.03
SGCEO43556 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 AC093536.2-201ENST00000565257 1406 ntBASIC2.37□□□□□ -2.03
SGCEO43556 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SGCEO43556 OR1L1-202ENST00000373686 1083 ntBASIC2.37□□□□□ -2.03
SGCEO43556 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
SGCEO43556 SNORA11.1-201ENST00000408133 129 ntBASIC2.37□□□□□ -2.03
SGCEO43556 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
SGCEO43556 RNA5SP21-201ENST00000410917 96 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AL445183.3-201ENST00000414168 502 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AL158050.1-201ENST00000416077 457 ntBASIC2.37□□□□□ -2.03
SGCEO43556 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.37□□□□□ -2.03
SGCEO43556 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.37□□□□□ -2.03
SGCEO43556 BEND7P1-201ENST00000422058 457 ntBASIC2.37□□□□□ -2.03
SGCEO43556 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms