Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF3O43395 AC005951.1-201ENST00000576706 485 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 MIR4528-201ENST00000577763 90 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC053481.4-201ENST00000583164 216 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC245014.2-201ENST00000603689 287 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC246785.4-201ENST00000605374 287 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC015540.1-201ENST00000615828 501 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 MIR6875-201ENST00000617506 72 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.49□□□□□ -1.69
PRPF3O43395 AC243312.2-201ENST00000623340 601 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 FRG1KP-201ENST00000623592 341 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF3O43395 AC084035.1-201ENST00000634543 607 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF3O43395 AC018555.1-201ENST00000567548 1980 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF3O43395 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF3O43395 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF3O43395 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 DEFB108F-201ENST00000344638 222 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 RNA5SP97-201ENST00000365006 84 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 RNU6-348P-201ENST00000384386 107 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 Y_RNA.548-201ENST00000384656 105 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 RPL23AP32-201ENST00000395315 459 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL603766.1-201ENST00000407763 664 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 RNU6-628P-201ENST00000410675 107 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 RN7SKP27-201ENST00000410684 333 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 ELOCP17-201ENST00000414751 326 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 AC119618.1-201ENST00000434191 222 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF3O43395 AC009961.2-201ENST00000435771 251 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC090774.1-201ENST00000435925 246 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 ATP5C1P1-201ENST00000441945 895 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.48□□□□□ -1.69
PRPF3O43395 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 AC146944.2-203ENST00000502493 354 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 KCTD9P5-201ENST00000504141 1170 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PRPF3O43395 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 AC139495.1-202ENST00000513164 354 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 MTCO2P4-201ENST00000517968 247 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 MTCYBP20-201ENST00000524239 1129 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 OR5D17P-201ENST00000531492 978 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF3O43395 AC123904.2-201ENST00000548059 300 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL133153.1-201ENST00000557756 303 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC090877.1-201ENST00000561418 344 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL360157.1-201ENST00000565962 87 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 RPL23AP84-201ENST00000571193 464 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 MIR3921-201ENST00000577308 85 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC006116.10-201ENST00000591836 581 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC078795.2-201ENST00000602835 1252 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 HMGB1P50-201ENST00000605814 607 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL355810.1-201ENST00000614629 552 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AL713922.2-201ENST00000619384 716 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC073534.2-201ENST00000620377 381 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 AC112204.3-201ENST00000623822 332 ntBASIC4.48□□□□□ -1.69
PRPF3O43395 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF3O43395 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
PRPF3O43395 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF3O43395 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF3O43395 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF3O43395 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF3O43395 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF3O43395 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 U1.1-201ENST00000384101 164 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 RNU6-297P-201ENST00000384636 107 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 Y_RNA.582-201ENST00000391023 95 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.47□□□□□ -1.69
PRPF3O43395 C1DP2-201ENST00000418167 426 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 VDAC1P3-201ENST00000434069 851 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 ARPC3P1-201ENST00000437218 533 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 FTH1P1-201ENST00000437933 532 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 ELOCP30-201ENST00000447108 299 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 RPL23AP31-201ENST00000456160 467 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 RPS3AP50-201ENST00000487064 803 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC135721.1-201ENST00000497954 479 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 RNU2-58P-201ENST00000516403 183 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 SNORA18.6-201ENST00000516792 115 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF3O43395 AP003122.4-201ENST00000530980 758 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms