Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RPL39P6-201ENST00000448289 150 ntBASIC3.04□□□□□ -1.92
MSH4O15457 USP9YP34-201ENST00000453983 808 ntBASIC3.04□□□□□ -1.92
MSH4O15457 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 RN7SL283P-201ENST00000489055 303 ntBASIC3.04□□□□□ -1.92
MSH4O15457 MLLT10P2-201ENST00000506434 249 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC113347.3-201ENST00000509113 148 ntBASIC3.04□□□□□ -1.92
MSH4O15457 RNU6-1225P-201ENST00000516336 65 ntBASIC3.04□□□□□ -1.92
MSH4O15457 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH4O15457 AL133271.1-201ENST00000538229 291 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC018630.1-201ENST00000541376 925 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH4O15457 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 MTND3P13-201ENST00000574391 343 ntBASIC3.04□□□□□ -1.92
MSH4O15457 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH4O15457 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH4O15457 VN1R83P-201ENST00000595685 445 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC245036.5-201ENST00000596330 847 ntBASIC3.04□□□□□ -1.92
MSH4O15457 BNIP3P27-201ENST00000599991 412 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC012119.1-201ENST00000603184 222 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AP001330.4-201ENST00000604350 154 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AL035413.2-201ENST00000604801 525 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC008277.2-201ENST00000605196 797 ntBASIC3.04□□□□□ -1.92
MSH4O15457 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH4O15457 AC024257.5-201ENST00000612739 531 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AL158163.2-201ENST00000619110 700 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC095031.1-201ENST00000623685 672 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC120349.2-201ENST00000625002 298 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH4O15457 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.04□□□□□ -1.92
MSH4O15457 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
MSH4O15457 TAB3P1-202ENST00000452645 1634 ntBASIC3.04□□□□□ -1.92
MSH4O15457 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MSH4O15457 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
MSH4O15457 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.03□□□□□ -1.92
MSH4O15457 MTND4P9-201ENST00000507819 1346 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AC109315.1-201ENST00000584143 1347 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AL079305.1-201ENST00000623159 3008 ntBASIC3.03□□□□□ -1.92
MSH4O15457 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MSH4O15457 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSH4O15457 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
MSH4O15457 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSH4O15457 SNRPEP3-201ENST00000338402 276 ntBASIC3.03□□□□□ -1.92
MSH4O15457 RNU5E-10P-201ENST00000363506 118 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
MSH4O15457 SNORA11.2-201ENST00000408318 127 ntBASIC3.03□□□□□ -1.92
MSH4O15457 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
MSH4O15457 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH4O15457 AC063976.3-201ENST00000426849 329 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.03□□□□□ -1.92
MSH4O15457 RPL23AP74-201ENST00000437246 471 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AP000936.2-201ENST00000447151 681 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AL109933.2-201ENST00000452651 260 ntBASIC3.03□□□□□ -1.92
MSH4O15457 RFC5P1-201ENST00000454419 874 ntBASIC3.03□□□□□ -1.92
MSH4O15457 MTND2P39-201ENST00000457230 764 ntBASIC3.03□□□□□ -1.92
MSH4O15457 RPS15AP17-201ENST00000470598 390 ntBASIC3.03□□□□□ -1.92
MSH4O15457 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
MSH4O15457 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.03□□□□□ -1.92
MSH4O15457 MTND3P3-201ENST00000505004 126 ntBASIC3.03□□□□□ -1.92
MSH4O15457 KLHL2P1-201ENST00000508691 521 ntBASIC3.03□□□□□ -1.92
MSH4O15457 SNORA31.21-201ENST00000517180 77 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AC104986.1-201ENST00000517978 436 ntBASIC3.03□□□□□ -1.92
MSH4O15457 SNRPGP16-201ENST00000533275 226 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.03□□□□□ -1.92
MSH4O15457 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.03□□□□□ -1.92
MSH4O15457 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.03□□□□□ -1.92
MSH4O15457 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.03□□□□□ -1.92
MSH4O15457 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.03□□□□□ -1.92
MSH4O15457 AC069431.2-201ENST00000604149 1099 ntBASIC3.03□□□□□ -1.92
MSH4O15457 OR2AS2P-201ENST00000606902 342 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AC023158.2-201ENST00000614876 543 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AL109620.1-201ENST00000618738 1197 ntBASIC3.03□□□□□ -1.92
MSH4O15457 AC007998.5-201ENST00000622938 237 ntBASIC3.03□□□□□ -1.92
MSH4O15457 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.03□□□□□ -1.92
MSH4O15457 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
MSH4O15457 CDR1-202ENST00000625883 1485 ntBASIC3.03□□□□□ -1.93
MSH4O15457 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
MSH4O15457 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MSH4O15457 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MSH4O15457 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
MSH4O15457 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MSH4O15457 SNORA51.4-201ENST00000364993 124 ntBASIC3.02□□□□□ -1.93
MSH4O15457 MIR620-201ENST00000385232 95 ntBASIC3.02□□□□□ -1.93
MSH4O15457 MIR591-201ENST00000385290 95 ntBASIC3.02□□□□□ -1.93
MSH4O15457 CYCSP45-201ENST00000402289 315 ntBASIC3.02□□□□□ -1.93
MSH4O15457 RNA5SP184-201ENST00000411071 108 ntBASIC3.02□□□□□ -1.93
MSH4O15457 YPEL5P1-201ENST00000419731 367 ntBASIC3.02□□□□□ -1.93
MSH4O15457 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.02□□□□□ -1.93
MSH4O15457 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.02□□□□□ -1.93
MSH4O15457 AC019097.1-201ENST00000424783 735 ntBASIC3.02□□□□□ -1.93
MSH4O15457 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.02□□□□□ -1.93
MSH4O15457 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH4O15457 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms