Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RPS3AP14-201ENST00000483907 780 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 RNU6-579P-201ENST00000516879 102 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 AP003497.1-201ENST00000528472 562 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 AC023538.1-201ENST00000534576 736 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.29□□□□□ -1.72
NPHP1O15259 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.29□□□□□ -1.72
NPHP1O15259 CKS1BP3-201ENST00000600888 237 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AC024560.3-201ENST00000608482 349 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.29□□□□□ -1.72
NPHP1O15259 AC008993.2-201ENST00000631744 806 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AC103706.2-201ENST00000638080 240 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NPHP1O15259 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPHP1O15259 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.29□□□□□ -1.72
NPHP1O15259 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPHP1O15259 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
NPHP1O15259 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPHP1O15259 AL136164.4-201ENST00000625013 2135 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC118273.1-201ENST00000525324 3006 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 RNU6-97P-201ENST00000363387 104 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPHP1O15259 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPHP1O15259 AL356421.1-201ENST00000403255 413 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 U3.39-201ENST00000408569 239 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.28□□□□□ -1.72
NPHP1O15259 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPHP1O15259 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.28□□□□□ -1.72
NPHP1O15259 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 AL591719.1-201ENST00000444669 744 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.28□□□□□ -1.72
NPHP1O15259 MTCO3P16-201ENST00000454456 754 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC104308.1-201ENST00000454621 333 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 AL136097.1-201ENST00000456945 913 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 RN7SL594P-201ENST00000470590 287 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 RPS23P3-201ENST00000470993 430 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC108860.1-201ENST00000484521 383 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 RPL7P47-201ENST00000497299 556 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.28□□□□□ -1.72
NPHP1O15259 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.28□□□□□ -1.72
NPHP1O15259 AC093809.1-201ENST00000509155 340 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 RN7SKP287-201ENST00000516546 266 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.28□□□□□ -1.72
NPHP1O15259 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.28□□□□□ -1.72
NPHP1O15259 AC136618.2-201ENST00000575091 400 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.28□□□□□ -1.72
NPHP1O15259 KLKP1-201ENST00000595979 403 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 AC093424.1-201ENST00000604999 338 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 MIR6130-201ENST00000619419 109 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.28□□□□□ -1.72
NPHP1O15259 ZNF807-201ENST00000328088 1707 ntBASIC4.28□□□□□ -1.72
NPHP1O15259 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPHP1O15259 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NPHP1O15259 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPHP1O15259 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.28□□□□□ -1.72
NPHP1O15259 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NPHP1O15259 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP1O15259 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
NPHP1O15259 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP1O15259 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP1O15259 RNU6-433P-201ENST00000363216 104 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 U3.42-201ENST00000408746 214 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.27□□□□□ -1.73
NPHP1O15259 AC007390.1-201ENST00000415722 356 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.27□□□□□ -1.73
NPHP1O15259 YWHAZP7-201ENST00000436906 631 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 SETP5-201ENST00000437270 562 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 RPS29P31-201ENST00000446147 164 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.27□□□□□ -1.73
NPHP1O15259 AC234775.1-201ENST00000454247 670 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 RPL27AP5-201ENST00000469428 449 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 UBE2DNL-203ENST00000474922 222 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 RPS3AP43-201ENST00000479743 781 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AC021382.1-201ENST00000483523 359 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AC104685.1-201ENST00000502445 371 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AC021678.1-201ENST00000505195 936 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.27□□□□□ -1.73
NPHP1O15259 RPL23AP94-201ENST00000512518 302 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 AC112673.1-201ENST00000513168 575 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.27□□□□□ -1.73
NPHP1O15259 AP000926.4-201ENST00000527351 454 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.27□□□□□ -1.73
NPHP1O15259 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 COX6CP3-201ENST00000580869 223 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.27□□□□□ -1.73
NPHP1O15259 AP001429.1-201ENST00000602568 530 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms