Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.24□□□□□ -2.05
UBFD1O14562 MIR5194-201ENST00000582634 120 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AL020997.3-201ENST00000602843 359 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AC092474.3-201ENST00000603022 568 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AC008962.1-201ENST00000605729 304 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AL450270.1-201ENST00000606160 391 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AC011890.2-201ENST00000613393 294 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AL110115.1-201ENST00000614396 364 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AC073569.3-201ENST00000619055 682 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
UBFD1O14562 MIR7843-201ENST00000622274 79 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 AP003122.6-201ENST00000623831 495 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 SEC63P2-201ENST00000503863 1939 ntBASIC2.24□□□□□ -2.05
UBFD1O14562 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.23□□□□□ -2.05
UBFD1O14562 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.23□□□□□ -2.05
UBFD1O14562 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBFD1O14562 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBFD1O14562 SFR1P1-201ENST00000403720 688 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.23□□□□□ -2.05
UBFD1O14562 FNDC3CP-201ENST00000420795 1155 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 NANOGP5-201ENST00000424456 877 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC233728.2-201ENST00000425348 757 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC079780.1-201ENST00000428259 207 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UBFD1O14562 ATP5F1P1-201ENST00000433775 569 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.23□□□□□ -2.05
UBFD1O14562 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.23□□□□□ -2.05
UBFD1O14562 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.23□□□□□ -2.05
UBFD1O14562 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.23□□□□□ -2.05
UBFD1O14562 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.23□□□□□ -2.05
UBFD1O14562 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 XKRY-201ENST00000510392 1100 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.23□□□□□ -2.05
UBFD1O14562 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.23□□□□□ -2.05
UBFD1O14562 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.23□□□□□ -2.05
UBFD1O14562 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.23□□□□□ -2.05
UBFD1O14562 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.23□□□□□ -2.05
UBFD1O14562 DNAJC8P1-201ENST00000554535 372 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.23□□□□□ -2.05
UBFD1O14562 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.23□□□□□ -2.05
UBFD1O14562 AC233266.2-201ENST00000567067 528 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC106734.1-201ENST00000568646 663 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.23□□□□□ -2.05
UBFD1O14562 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.23□□□□□ -2.05
UBFD1O14562 KATNBL1P1-201ENST00000605192 748 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.23□□□□□ -2.05
UBFD1O14562 AC090116.1-201ENST00000615679 446 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC140725.3-201ENST00000616193 880 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 AC025034.2-201ENST00000623264 286 ntBASIC2.23□□□□□ -2.05
UBFD1O14562 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBFD1O14562 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
UBFD1O14562 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.22□□□□□ -2.05
UBFD1O14562 MTND5P11-201ENST00000511037 1812 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UBFD1O14562 SNORA14A-201ENST00000364773 135 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 SNORA80E-201ENST00000384744 137 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 MIR504-201ENST00000385065 83 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
UBFD1O14562 RNU2-25P-201ENST00000411041 191 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.22□□□□□ -2.05
UBFD1O14562 CR848007.2-201ENST00000424918 787 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 MTATP6P4-201ENST00000427725 675 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.22□□□□□ -2.05
UBFD1O14562 AL513321.1-201ENST00000441175 761 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 HSFY3P-201ENST00000444242 1191 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 RPS23P3-201ENST00000470993 430 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.22□□□□□ -2.05
UBFD1O14562 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.22□□□□□ -2.05
UBFD1O14562 TTC39CP1-201ENST00000512513 755 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.22□□□□□ -2.05
UBFD1O14562 RPPH1-2P-201ENST00000516688 293 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AC109329.2-201ENST00000519658 482 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 HIGD1AP6-201ENST00000521833 279 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 OR4R1P-201ENST00000529879 463 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 PRELID2P1-201ENST00000552837 301 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.22□□□□□ -2.05
UBFD1O14562 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.22□□□□□ -2.05
UBFD1O14562 AC009163.5-201ENST00000575421 637 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
UBFD1O14562 AC024560.3-201ENST00000608482 349 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AC013468.1-201ENST00000608680 598 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 AP001033.2-201ENST00000609701 1003 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 TUG1_1.1-201ENST00000610654 145 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
UBFD1O14562 AC002064.3-201ENST00000623448 346 ntBASIC2.22□□□□□ -2.05
UBFD1O14562 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.22□□□□□ -2.05
UBFD1O14562 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
UBFD1O14562 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
UBFD1O14562 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
UBFD1O14562 RNU6-1249P-201ENST00000363237 111 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 RNU6-444P-201ENST00000383988 108 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 RNU6-1027P-201ENST00000383998 107 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 RNU6-837P-201ENST00000391056 108 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.21□□□□□ -2.06
UBFD1O14562 AC007000.2-201ENST00000442564 487 ntBASIC2.21□□□□□ -2.06
UBFD1O14562 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.21□□□□□ -2.06
UBFD1O14562 AC104073.1-201ENST00000451988 151 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms